RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W AIM22P47051 409 aa2.17□□□□□ -2.06
SNC1YAL030W IMD3P50095 523 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W UBP8P50102 471 aa2.17□□□□□ -2.06
SNC1YAL030W FMS1P50264 508 aa2.17□□□□□ -2.06
SNC1YAL030W PYK2P52489 506 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W YGR016WP53209 190 aa2.17□□□□□ -2.06
SNC1YAL030W YTP1P53584 459 aa2.17□□□□□ -2.06
SNC1YAL030W ASI1P54074 624 aa2.17□□□□□ -2.06
SNC1YAL030W SKO1Q02100 647 aa2.17□□□□□ -2.06
SNC1YAL030W TOF2Q02208 771 aa2.17□□□□□ -2.06
SNC1YAL030W HOT1Q03213 719 aa2.17□□□□□ -2.06
SNC1YAL030W SNU56Q03782 492 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W YMR160WQ03823 816 aa2.17□□□□□ -2.06
SNC1YAL030W PDS5Q04264 1277 aa2.17□□□□□ -2.06
SNC1YAL030W TAP42Q04372 366 aa2.17□□□□□ -2.06
SNC1YAL030W RRP45Q05636 305 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W RBS1Q05672 457 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W ADE13Q05911 482 aaKnown RBP2.17□□□□□ -2.06
SNC1YAL030W PDR8Q06149 701 aa2.17□□□□□ -2.06
SNC1YAL030W ATG26Q06321 1198 aa2.17□□□□□ -2.06
SNC1YAL030W CDC45Q08032 650 aa2.17□□□□□ -2.06
SNC1YAL030W RPS10AQ08745 105 aaPredicted RBP2.17□□□□□ -2.06
SNC1YAL030W MED2Q12124 431 aa2.17□□□□□ -2.06
SNC1YAL030W SKS1Q12505 502 aa2.17□□□□□ -2.06
SNC1YAL030W AFI1Q99222 893 aa2.17□□□□□ -2.06
SNC1YAL030W RAV1P47104 1357 aa2.16□□□□□ -2.06
SNC1YAL030W GPH1P06738 902 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W RHO2P06781 192 aa2.16□□□□□ -2.06
SNC1YAL030W RPL3P14126 387 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W NUP1P20676 1076 aa2.16□□□□□ -2.06
SNC1YAL030W KRR1P25586 316 aaPredicted RBP2.16□□□□□ -2.06
SNC1YAL030W TFB1P32776 642 aa2.16□□□□□ -2.06
SNC1YAL030W SWH1P35845 1188 aa2.16□□□□□ -2.06
SNC1YAL030W TUL1P36096 758 aa2.16□□□□□ -2.06
SNC1YAL030W YKL023WP36103 277 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W SLM4P38247 162 aa2.16□□□□□ -2.06
SNC1YAL030W NTC20P38302 140 aaPredicted RBP2.16□□□□□ -2.06
SNC1YAL030W RRT2P38332 387 aa2.16□□□□□ -2.06
SNC1YAL030W ARP1P38696 384 aa2.16□□□□□ -2.06
SNC1YAL030W PHO90P39535 881 aa2.16□□□□□ -2.06
SNC1YAL030W ZIM17P42844 174 aa2.16□□□□□ -2.06
SNC1YAL030W RPS10BP46784 105 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W ATG27P46989 271 aa2.16□□□□□ -2.06
SNC1YAL030W TOM22P49334 152 aa2.16□□□□□ -2.06
SNC1YAL030W YGR126WP53274 230 aa2.16□□□□□ -2.06
SNC1YAL030W SLG1P54867 378 aa2.16□□□□□ -2.06
SNC1YAL030W RSM23Q01163 450 aa2.16□□□□□ -2.06
SNC1YAL030W VTC3Q02725 835 aa2.16□□□□□ -2.06
SNC1YAL030W OAZ1Q02803 292 aa2.16□□□□□ -2.06
SNC1YAL030W FMP30Q02883 468 aa2.16□□□□□ -2.06
SNC1YAL030W PEX25Q02969 394 aa2.16□□□□□ -2.06
SNC1YAL030W COQ9Q05779 260 aa2.16□□□□□ -2.06
SNC1YAL030W TPO3Q06451 622 aa2.16□□□□□ -2.06
SNC1YAL030W ECM30Q06673 1274 aa2.16□□□□□ -2.06
SNC1YAL030W FMP45Q07651 309 aa2.16□□□□□ -2.06
SNC1YAL030W APL5Q08951 932 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W SPE3Q12074 293 aaKnown RBP2.16□□□□□ -2.06
SNC1YAL030W NCE102Q12207 173 aaRIP-Chip data2.16□□□□□ -2.06not detected
SNC1YAL030W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SNC1YAL030W SUT2Q12286 268 aa2.16□□□□□ -2.06
SNC1YAL030W BRR1Q99177 341 aaPredicted RBP2.16□□□□□ -2.06
SNC1YAL030W PEP4P07267 405 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W NAT1P12945 854 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W MBR1P23493 339 aa2.15□□□□□ -2.07
SNC1YAL030W MNE1P24720 663 aa2.15□□□□□ -2.07
SNC1YAL030W YCR006CP25350 157 aa2.15□□□□□ -2.07
SNC1YAL030W SPB1P25582 841 aaPredicted RBP2.15□□□□□ -2.07
SNC1YAL030W RAD14P28519 371 aa2.15□□□□□ -2.07
SNC1YAL030W YIM1P28625 365 aa2.15□□□□□ -2.07
SNC1YAL030W MGM1P32266 881 aa2.15□□□□□ -2.07
SNC1YAL030W GYP6P32806 458 aa2.15□□□□□ -2.07
SNC1YAL030W THI2P38141 450 aa2.15□□□□□ -2.07
SNC1YAL030W TOM71P38825 639 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W RIX1P38883 763 aaPredicted RBP2.15□□□□□ -2.07
SNC1YAL030W VPS41P38959 992 aa2.15□□□□□ -2.07
SNC1YAL030W GDI1P39958 451 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W IRC7P43623 340 aa2.15□□□□□ -2.07
SNC1YAL030W YJR154WP47181 346 aa2.15□□□□□ -2.07
SNC1YAL030W COS5P47187 383 aa2.15□□□□□ -2.07
SNC1YAL030W YGR149WP48236 432 aa2.15□□□□□ -2.07
SNC1YAL030W YGL108CP53139 140 aa2.15□□□□□ -2.07
SNC1YAL030W YGR111WP53265 400 aa2.15□□□□□ -2.07
SNC1YAL030W CAF130P53280 1122 aaPredicted RBP2.15□□□□□ -2.07
SNC1YAL030W YNL144CP53907 740 aa2.15□□□□□ -2.07
SNC1YAL030W HEF3P53978 1044 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W YVH1Q02256 364 aaKnown RBP2.15□□□□□ -2.07
SNC1YAL030W CAC2Q04199 468 aa2.15□□□□□ -2.07
SNC1YAL030W ARP10Q04549 284 aa2.15□□□□□ -2.07
SNC1YAL030W COS7Q07788 383 aa2.15□□□□□ -2.07
SNC1YAL030W YOR365CQ08844 703 aa2.15□□□□□ -2.07
SNC1YAL030W PGC1Q08959 321 aa2.15□□□□□ -2.07
SNC1YAL030W HSP42Q12329 375 aa2.15□□□□□ -2.07
SNC1YAL030W YER145C-AA0A023PYF4 145 aa2.14□□□□□ -2.07
SNC1YAL030W HIP1P06775 603 aa2.14□□□□□ -2.07
SNC1YAL030W COR1P07256 457 aa2.14□□□□□ -2.07
SNC1YAL030W TUB1P09733 447 aaKnown RBP2.14□□□□□ -2.07
SNC1YAL030W CLN1P20437 546 aa2.14□□□□□ -2.07
SNC1YAL030W CNA1P23287 553 aa2.14□□□□□ -2.07
SNC1YAL030W PPH22P23595 377 aa2.14□□□□□ -2.07
SNC1YAL030W RRP7P25368 297 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms