RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 MAK5P38112 773 aaPredicted RBP8.55□□□□□ -1.04
LSR1LSR1 SWD1P39706 426 aa8.55□□□□□ -1.04
LSR1LSR1 YJL070CP40361 888 aa8.55□□□□□ -1.04
LSR1LSR1 MSS2P40990 351 aa8.55□□□□□ -1.04
LSR1LSR1 TES1P41903 349 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 YRB1P41920 201 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 SWP82P43554 623 aa8.55□□□□□ -1.04
LSR1LSR1 COG1P53079 417 aa8.55□□□□□ -1.04
LSR1LSR1 CLD1P53264 445 aa8.55□□□□□ -1.04
LSR1LSR1 BNI4P53858 892 aa8.55□□□□□ -1.04
LSR1LSR1 ARP4P80428 489 aa8.55□□□□□ -1.04
LSR1LSR1 CIK1Q01649 594 aa8.55□□□□□ -1.04
LSR1LSR1 GCN5Q03330 439 aa8.55□□□□□ -1.04
LSR1LSR1 HER2Q03557 464 aa8.55□□□□□ -1.04
LSR1LSR1 TRM12Q04235 462 aa8.55□□□□□ -1.04
LSR1LSR1 GPI11Q06636 219 aa8.55□□□□□ -1.04
LSR1LSR1 DTD1Q07648 150 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 YOL036WQ08206 761 aa8.55□□□□□ -1.04
LSR1LSR1 YLL054CQ12244 843 aa8.55□□□□□ -1.04
LSR1LSR1 THP2O13539 261 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 HXK2P04807 486 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 HTA2P04912 132 aa8.54□□□□□ -1.04
LSR1LSR1 CMK2P22517 447 aa8.54□□□□□ -1.04
LSR1LSR1 BUD23P25627 275 aaPredicted RBP8.54□□□□□ -1.04
LSR1LSR1 POT1P27796 417 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
LSR1LSR1 MF(ALPHA)2P32435 120 aa8.54□□□□□ -1.04
LSR1LSR1 CTF13P35203 478 aa8.54□□□□□ -1.04
LSR1LSR1 MAE1P36013 669 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 ADD66P36040 267 aa8.54□□□□□ -1.04
LSR1LSR1 NTR2P36118 322 aaPredicted RBP8.54□□□□□ -1.04
LSR1LSR1 LDB7P38210 180 aa8.54□□□□□ -1.04
LSR1LSR1 YHL012WP38709 493 aa8.54□□□□□ -1.04
LSR1LSR1 EFM1P38732 585 aa8.54□□□□□ -1.04
LSR1LSR1 RPL34BP40525 121 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 GUS1P46655 708 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
LSR1LSR1 SHY1P53266 389 aa8.54□□□□□ -1.04
LSR1LSR1 ARE2P53629 642 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 YNR063WP53749 607 aa8.54□□□□□ -1.04
LSR1LSR1 ORC3P54790 616 aa8.54□□□□□ -1.04
LSR1LSR1 RCF1Q03713 159 aa8.54□□□□□ -1.04
LSR1LSR1 RSM24Q03976 319 aa8.54□□□□□ -1.04
LSR1LSR1 YDR124WQ04608 324 aa8.54□□□□□ -1.04
LSR1LSR1 RPN8Q08723 338 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 AIR2Q12476 344 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 TIF6Q12522 245 aaKnown RBP8.54□□□□□ -1.04
LSR1LSR1 GCN3P14741 305 aa8.53□□□□□ -1.04
LSR1LSR1 CBS2P14905 389 aa8.53□□□□□ -1.04
LSR1LSR1 SDH2P21801 266 aa8.53□□□□□ -1.04
LSR1LSR1 OCA4P25366 362 aa8.53□□□□□ -1.04
LSR1LSR1 PUP3P25451 205 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 VMA6P32366 345 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 VPH1P32563 840 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 COX13P32799 129 aa8.53□□□□□ -1.04
LSR1LSR1 THI80P35202 319 aa8.53□□□□□ -1.04
LSR1LSR1 ALY1P36117 915 aa8.53□□□□□ -1.04
LSR1LSR1 APM3P38153 483 aa8.53□□□□□ -1.04
LSR1LSR1 RFS1P38234 210 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 MPT5P39016 859 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
LSR1LSR1 SIT1P39980 628 aa8.53□□□□□ -1.04
LSR1LSR1 THO1P40040 218 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 ALG8P40351 577 aa8.53□□□□□ -1.04
LSR1LSR1 PSF2P40359 213 aa8.53□□□□□ -1.04
LSR1LSR1 GCD10P41814 478 aa8.53□□□□□ -1.04
LSR1LSR1 STB2P46679 850 aa8.53□□□□□ -1.04
LSR1LSR1 YJL055WP47044 245 aa8.53□□□□□ -1.04
LSR1LSR1 VPS25P47142 202 aa8.53□□□□□ -1.04
LSR1LSR1 UGO1Q03327 502 aa8.53□□□□□ -1.04
LSR1LSR1 PEX12Q04370 399 aa8.53□□□□□ -1.04
LSR1LSR1 NUT2Q06213 157 aa8.53□□□□□ -1.04
LSR1LSR1 MCP2Q06567 569 aa8.53□□□□□ -1.04
LSR1LSR1 HER1Q12276 1246 aa8.53□□□□□ -1.04
LSR1LSR1 MAM3Q12296 706 aa8.53□□□□□ -1.04
LSR1LSR1 LPX1Q12405 387 aaKnown RBP8.53□□□□□ -1.04
LSR1LSR1 PFK27Q12471 397 aaPredicted RBP8.53□□□□□ -1.04
LSR1LSR1 YDR524C-BQ3E6R4 66 aa8.53□□□□□ -1.04
LSR1LSR1 YOL159C-AQ3E769 90 aa8.53□□□□□ -1.04
LSR1LSR1 TPK3P05986 398 aa8.52□□□□□ -1.05
LSR1LSR1 ATP1P07251 545 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 RBK1P25332 333 aa8.52□□□□□ -1.05
LSR1LSR1 ADK2P26364 225 aa8.52□□□□□ -1.05
LSR1LSR1 UBC8P28263 218 aa8.52□□□□□ -1.05
LSR1LSR1 MRPL9P31334 269 aa8.52□□□□□ -1.05
LSR1LSR1 SYN8P31377 255 aa8.52□□□□□ -1.05
LSR1LSR1 DOM34P33309 386 aa8.52□□□□□ -1.05
LSR1LSR1 YKL100CP34248 587 aa8.52□□□□□ -1.05
LSR1LSR1 TSA1P34760 196 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 GCS1P35197 352 aa8.52□□□□□ -1.05
LSR1LSR1 PHO11P35842 467 aa8.52□□□□□ -1.05
LSR1LSR1 PHO12P38693 467 aa8.52□□□□□ -1.05
LSR1LSR1 PEX18P38855 283 aa8.52□□□□□ -1.05
LSR1LSR1 DHH1P39517 506 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 ERV46P39727 415 aa8.52□□□□□ -1.05
LSR1LSR1 RBG1P39729 369 aa8.52□□□□□ -1.05
LSR1LSR1 MTW1P39731 289 aa8.52□□□□□ -1.05
LSR1LSR1 AYR1P40471 297 aa8.52□□□□□ -1.05
LSR1LSR1 GTS1P40956 396 aa8.52□□□□□ -1.05
LSR1LSR1 BST1P43571 1029 aa8.52□□□□□ -1.05
LSR1LSR1 PRP24P49960 444 aaKnown RBP8.52□□□□□ -1.05
LSR1LSR1 AMA1P50082 593 aa8.52□□□□□ -1.05
LSR1LSR1 KEL2P50090 882 aa8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 78.4 ms