RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 GSG1L2A8MUP6 293 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 GCFC2P16383 781 aaKnown RBP19.42■□□□□ 0.7
SCARB2-223ENST00000640640 PTPREP23469 700 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 PEX26Q7Z412 305 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 CCDC114Q96M63 670 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 MTA3Q9BTC8 594 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 DHX36Q9H2U1 1008 aaKnown RBP19.42■□□□□ 0.7
SCARB2-223ENST00000640640 hCG_1984214I3L0E3 225 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 ATP2C2O75185 946 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 IFT20Q8IY31 132 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 ZNF713Q8N859 430 aaPredicted RBP19.42■□□□□ 0.7
SCARB2-223ENST00000640640 LY9Q9HBG7 655 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 SAMSN1Q9NSI8 373 aaKnown RBP19.42■□□□□ 0.7
SCARB2-223ENST00000640640 DIP2AQ14689 1571 aa19.42■□□□□ 0.7
SCARB2-223ENST00000640640 EEF1GP26641 437 aaKnown RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 GPR161Q8N6U8 529 aaKnown RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 UBL4BQ8N7F7 174 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 DHTKD1Q96HY7 919 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 PAIP2Q9BPZ3 127 aaKnown RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 PLA2G12BQ9BX93 195 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 AZI2Q9H6S1 392 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 EBAG9O00559 213 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 TRPC3Q13507 836 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 RPGRIP1Q96KN7 1286 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 COA1Q9GZY4 146 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 DCP1AQ9NPI6 582 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 GDF11O95390 407 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 ENAHQ8N8S7 591 aaPredicted RBP19.41■□□□□ 0.7
SCARB2-223ENST00000640640 STK36Q9NRP7 1315 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 USP32Q8NFA0 1604 aa19.41■□□□□ 0.7
SCARB2-223ENST00000640640 CHGBP05060 677 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 ZNF658Q5TYW1 1059 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 SELENOSQ9BQE4 189 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 IQCGQ9H095 443 aaKnown RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 PI4KBQ9UBF8 816 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 ATP1A3P13637 1013 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 CDC27P30260 824 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GOLGA8FQ08AF8 430 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GOLGA8DPQ0D2H9 430 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 DCAF15Q66K64 600 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 KLHL7Q8IXQ5 586 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 ACTN4O43707 911 aaKnown RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 KIF4AO95239 1232 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GRM1Q13255 1194 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 PABPC4Q13310 644 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 PDIA6Q15084 440 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 ARL6IP4Q66PJ3 421 aaKnown RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 OTUD6AQ7L8S5 288 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 ZMYND15Q9H091 742 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 METTL14Q9HCE5 456 aaKnown RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GINS2Q9Y248 185 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 IVNS1ABPQ9Y6Y0 642 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 MYL1P05976 194 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 WHAMMP3Q1A5X7 153 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GNPTABQ3T906 1256 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 P2RX5Q93086 422 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 GJA10Q969M2 543 aa19.4■□□□□ 0.7
SCARB2-223ENST00000640640 NSRP1Q9H0G5 558 aaKnown RBP19.4■□□□□ 0.7
SCARB2-223ENST00000640640 POLR2FP61218 127 aaKnown RBP19.39■□□□□ 0.7
SCARB2-223ENST00000640640 IRX3P78415 501 aaPredicted RBP19.39■□□□□ 0.7
SCARB2-223ENST00000640640 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.7
SCARB2-223ENST00000640640 AS3MTQ9HBK9 375 aa19.39■□□□□ 0.7
SCARB2-223ENST00000640640 CCPG1Q9ULG6 757 aa19.39■□□□□ 0.7
SCARB2-223ENST00000640640 RABGAP1Q9Y3P9 1069 aa19.39■□□□□ 0.7
SCARB2-223ENST00000640640 OVOS2A0A0G2JMS6 1433 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 MMP10P09238 476 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 GBP6Q6ZN66 633 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 KRT26Q7Z3Y9 468 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 SYCE1Q8N0S2 351 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 ARHGEF1Q92888 912 aaKnown RBP19.39■□□□□ 0.69
SCARB2-223ENST00000640640 PPP1R13BQ96KQ4 1090 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 TEKT3Q9BXF9 490 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 TRIM31Q9BZY9 425 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 CD209Q9NNX6 404 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 FRMPD1Q5SYB0 1578 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 ARHGEF16Q5VV41 709 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 MCF2L2Q86YR7 1114 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 NPR1P16066 1061 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 KCNG1Q9UIX4 513 aa19.39■□□□□ 0.69
SCARB2-223ENST00000640640 BMP3P12645 472 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 LIN9Q5TKA1 542 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 RESP18Q5W5W9 173 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 SGMS1Q86VZ5 419 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.38■□□□□ 0.69
SCARB2-223ENST00000640640 PAGE5Q96GU1 130 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 IL25Q9H293 177 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 ZNF408Q9H9D4 720 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 RCAN1P53805 252 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
SCARB2-223ENST00000640640 XKR9Q5GH70 373 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 PPP1R14CQ8TAE6 165 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 ZNF609O15014 1411 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 LRCH2Q5VUJ6 765 aa19.38■□□□□ 0.69
SCARB2-223ENST00000640640 U2AF1L4Q8WU68 220 aaKnown RBP19.38■□□□□ 0.69
SCARB2-223ENST00000640640 FAM84BQ96KN1 310 aaPredicted RBP19.38■□□□□ 0.69
SCARB2-223ENST00000640640 EFCAB8A8MWE9 144 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms