RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	GOLGA6L1	Q8N7Z2	621 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EPS8L3	Q8TE67	593 aa	Known RBP	4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FNIP1	Q8TF40	1166 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HPS3	Q969F9	1004 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KCNK17	Q96T54	332 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PLVAP	Q9BX97	442 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	AP1M1	Q9BXS5	423 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	NIFK	Q9BYG3	293 aa	Known RBP	4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ESF1	Q9H501	851 aa	Known RBP	4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SAGE1	Q9NXZ1	904 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PNMA3	Q9UL41	463 aa		4.62	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GOLGA6L10	A0A0M3HER8	536 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836		K7ENM7	598 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CASQ2	O14958	399 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SPTLC1	O15269	473 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CYP17A1	P05093	508 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HSPA4	P34932	840 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CD86	P42081	329 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HAL	P42357	657 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ST13	P50502	369 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ARID5A	Q03989	594 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MCL1	Q07820	350 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	NFKBIB	Q15653	356 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ARSH	Q5FYA8	562 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GALNT5	Q7Z7M9	940 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	USP38	Q8NB14	1042 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ACMSD	Q8TDX5	336 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SGCD	Q92629	289 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ARHGEF2	Q92974	986 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RBM14	Q96PK6	669 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SLC13A1	Q9BZW2	595 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TAOK3	Q9H2K8	898 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KIAA1468	Q9P260	1216 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ANKIB1	Q9P2G1	1089 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FBXL5	Q9UKA1	691 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CCDC144A	A2RUR9	1427 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZBTB39	O15060	712 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KLHL41	O60662	606 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EIF4B	P23588	611 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	NASP	P49321	788 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LIMK1	P53667	647 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ADCY1	Q08828	1119 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZBTB17	Q13105	803 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PDE1C	Q14123	709 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	EZH2	Q15910	746 aa	Known RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	DMRTA1	Q5VZB9	504 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	OLFML1	Q6UWY5	402 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RNF19B	Q6ZMZ0	732 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	JAML	Q86YT9	394 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SEPT12	Q8IYM1	358 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RNF168	Q8IYW5	571 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ZNF710	Q8N1W2	664 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ANKRD42	Q8N9B4	389 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SPERT	Q8NA61	448 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	COL26A1	Q96A83	441 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FHDC1	Q9C0D6	1143 aa	Predicted RBP	4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CD93	Q9NPY3	652 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TCP11L1	Q9NUJ3	509 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SSC5D	A1L4H1	1573 aa		4.61	□□□□□ -1.67
UBE2D3-233	ENST00000618836	IFT172	Q9UG01	1749 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PPP1R3G	B7ZBB8	358 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MATR3	P43243	847 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	PROSER3	Q2NL68	480 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MUM1L1	Q5H9M0	696 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CEP135	Q66GS9	1140 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FAM196A	Q6ZSG2	479 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CAPN12	Q6ZSI9	719 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RAPH1	Q70E73	1250 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RALYL	Q86SE5	291 aa	Known RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RSPH3	Q86UC2	560 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	LRRC43	Q8N309	656 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ESX1	Q8N693	406 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	HERPUD2	Q9BSE4	406 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TTPAL	Q9BTX7	342 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KCTD10	Q9H3F6	313 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RASSF1	Q9NS23	344 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ATP8A2	Q9NTI2	1148 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	BIN2	Q9UBW5	565 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SSX2IP	Q9Y2D8	614 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SOS1	Q07889	1333 aa	Predicted RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MTUS2	Q5JR59	1369 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FAM221A	A4D161	298 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CNOT4	O95628	575 aa	Known RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GNAT2	P19087	354 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MAP2K2	P36507	400 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	TM4SF4	P48230	202 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ITIH3	Q06033	890 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GNL2	Q13823	731 aa	Known RBP	4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ATP2B3	Q16720	1220 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	CAVIN4	Q5BKX8	364 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	ISM2	Q6H9L7	571 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	KRT26	Q7Z3Y9	468 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	SMYD1	Q8NB12	490 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	RDH13	Q8NBN7	331 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	MIEF2	Q96C03	454 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	GMCL1	Q96IK5	515 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	OCSTAMP	Q9BR26	566 aa		4.6	□□□□□ -1.67
UBE2D3-233	ENST00000618836	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.6	□□□□□ -1.67

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