RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 CHUKO15111 745 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 NFRKBQ6P4R8 1299 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 VIPAS39Q9H9C1 493 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 ATG3Q9NT62 314 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 FAM205CA6NFA0 338 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 UBE2Q2LH0YL09 131 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 ACTN4O43707 911 aaKnown RBP22.66■■□□□ 1.22
PCSK6-217ENST00000618548 LDHCP07864 332 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 CALCOCO2Q13137 446 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 LRRC1Q9BTT6 524 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 CTDP1Q9Y5B0 961 aaPredicted RBP22.66■■□□□ 1.22
PCSK6-217ENST00000618548 DHTKD1Q96HY7 919 aaPredicted RBP22.66■■□□□ 1.22
PCSK6-217ENST00000618548 DENND2AQ9ULE3 1009 aa22.66■■□□□ 1.22
PCSK6-217ENST00000618548 PLEKHA8P1O95397 391 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 PRPHP41219 470 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 SARNPP82979 210 aaKnown RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 MROH2AA6NES4 1674 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 CLGNO14967 610 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 SLC8A1P32418 973 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 CETN2P41208 172 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 FMNL3Q8IVF7 1028 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 IFT74Q96LB3 600 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 CHD1O14646 1710 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 MROH5Q6ZUA9 1318 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 SNAP23O00161 211 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 RABL6Q3YEC7 729 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 FOXP4Q8IVH2 680 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 RGS16O15492 202 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 PTPAQ15257 358 aa22.65■■□□□ 1.22
PCSK6-217ENST00000618548 HIBCHQ6NVY1 386 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 CCNI2Q6ZMN8 369 aaPredicted RBP22.65■■□□□ 1.22
PCSK6-217ENST00000618548 CYP2D7A0A087X1C5 515 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 ANO9A1A5B4 782 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 PCK1P35558 622 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 IFNAR2P48551 515 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 MSANTD4Q8NCY6 345 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.64■■□□□ 1.22
PCSK6-217ENST00000618548 NUCKS1Q9H1E3 243 aaKnown RBP22.64■■□□□ 1.22
PCSK6-217ENST00000618548 VWDEQ8N2E2 1590 aa22.64■■□□□ 1.22
PCSK6-217ENST00000618548 EXOC5O00471 708 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 CCNE1P24864 410 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 ATP11AP98196 1134 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 KCND1Q9NSA2 647 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 OVOS2A0A0J9YW53 1432 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 OVOS2Q6IE36 1432 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 NCK2O43639 380 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 FLOT1O75955 427 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 GUCY1A3Q02108 690 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 HPSEQ9Y251 543 aa22.64■■□□□ 1.21
PCSK6-217ENST00000618548 THAP9Q9H5L6 903 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.63■■□□□ 1.217e-7■■■■□ 23.6
PCSK6-217ENST00000618548 NOVA2Q9UNW9 492 aaKnown RBP22.63■■□□□ 1.21
PCSK6-217ENST00000618548 KRT25Q7Z3Z0 450 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 SPATA4Q8NEY3 305 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 CCDC77Q9BR77 488 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 TRAPPC10P48553 1259 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 PPP2R5AQ15172 486 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 DENND2CQ68D51 928 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 CCDC63Q8NA47 563 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 STK36Q9NRP7 1315 aa22.63■■□□□ 1.21
PCSK6-217ENST00000618548 NPHP4O75161 1426 aaPredicted RBP22.63■■□□□ 1.21
PCSK6-217ENST00000618548 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
PCSK6-217ENST00000618548 WDR19Q8NEZ3 1342 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 GYG1P46976 350 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 FOXO4P98177 505 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 CALCRLQ16602 461 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 SAP30BPQ9UHR5 308 aaKnown RBP22.62■■□□□ 1.21
PCSK6-217ENST00000618548 OR52Z1P0C646 297 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 SLC20A2Q08357 652 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 LRRC41Q15345 812 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 ERMNQ8TAM6 284 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
PCSK6-217ENST00000618548 SETDB1Q15047 1291 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 INTS8Q75QN2 995 aaKnown RBP22.62■■□□□ 1.21
PCSK6-217ENST00000618548 OSBPL9Q96SU4 736 aa22.62■■□□□ 1.21
PCSK6-217ENST00000618548 NAP1L3Q99457 506 aaPredicted RBP22.62■■□□□ 1.21
PCSK6-217ENST00000618548 TARSL2A2RTX5 802 aaKnown RBP22.61■■□□□ 1.21
PCSK6-217ENST00000618548 SMCO2A6NFE2 343 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 GOLGA8HP0CJ92 632 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 ABCB4P21439 1286 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 MYOCDQ8IZQ8 938 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 PNMA1Q8ND90 353 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 PLVAPQ9BX97 442 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 BIN2Q9UBW5 565 aaPredicted RBP22.61■■□□□ 1.21
PCSK6-217ENST00000618548 PRPF3O43395 683 aaKnown RBP22.61■■□□□ 1.21
PCSK6-217ENST00000618548 SGMS1Q86VZ5 419 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 SYNE4Q8N205 404 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 PLAAQ9Y263 795 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 PACS2Q86VP3 889 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 VSIG1Q86XK7 387 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 CXorf56Q9H5V9 222 aa22.61■■□□□ 1.21
PCSK6-217ENST00000618548 EIF3HO15372 352 aaKnown RBP eCLIP22.6■■□□□ 1.21
PCSK6-217ENST00000618548 RBM5P52756 815 aaKnown RBP eCLIP22.6■■□□□ 1.212e-8■■■□□ 16.5
PCSK6-217ENST00000618548 LRCH2Q5VUJ6 765 aa22.6■■□□□ 1.21
PCSK6-217ENST00000618548 ANKRD42Q8N9B4 389 aa22.6■■□□□ 1.21
PCSK6-217ENST00000618548 NDST4Q9H3R1 872 aa22.6■■□□□ 1.21
PCSK6-217ENST00000618548 NKIRAS1Q9NYS0 192 aa22.6■■□□□ 1.21
PCSK6-217ENST00000618548 ATP8A1Q9Y2Q0 1164 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms