RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 EFCAB13Q8IY85 973 aa18.38■□□□□ 0.53
SIN3B-206ENST00000595541 MICALL1Q8N3F8 863 aa18.38■□□□□ 0.53
SIN3B-206ENST00000595541 SALL4Q9UJQ4 1053 aa18.38■□□□□ 0.53
SIN3B-206ENST00000595541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.38■□□□□ 0.53
SIN3B-206ENST00000595541 MOCS3O95396 460 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 CALM1P0DP23 149 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 CALM2P0DP24 149 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 CALM3P0DP25 149 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 FCER1AP12319 257 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 LIG3P49916 1009 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 KCNB1Q14721 858 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 NFRKBQ6P4R8 1299 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 BLIDQ8IZY5 108 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 STAG2Q8N3U4 1231 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
SIN3B-206ENST00000595541 ARHGAP20Q9P2F6 1191 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 PSMA7O14818 248 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 VAV2P52735 878 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 RCSD1Q6JBY9 416 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 SPATA4Q8NEY3 305 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 CNOT6LQ96LI5 555 aaKnown RBP18.37■□□□□ 0.53
SIN3B-206ENST00000595541 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
SIN3B-206ENST00000595541 CACNA1SQ13698 1873 aa18.37■□□□□ 0.53
SIN3B-206ENST00000595541 ERVV-1B6SEH8 477 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 NCK2O43639 380 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 CPP00450 1065 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 KIF5AQ12840 1032 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 MMGT1Q8N4V1 131 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 EHBP1Q8NDI1 1231 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 PCMTD1Q96MG8 357 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-206ENST00000595541 PYM1Q9BRP8 204 aaKnown RBP18.36■□□□□ 0.53
SIN3B-206ENST00000595541 TTMPQ5BVD1 217 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 CCDC170Q8IYT3 715 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 BCAS4Q8TDM0 211 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 FAM169AQ9Y6X4 670 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 STRCP1A6NGW2 1772 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 A0A087WUV0 522 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-206ENST00000595541 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-206ENST00000595541 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
SIN3B-206ENST00000595541 M0R2N6 131 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 EVA1CP58658 441 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 INF2Q27J81 1249 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 DTHD1Q6ZMT9 781 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 SH3GL2Q99962 352 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 BRIP1Q9BX63 1249 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 SAMM50Q9Y512 469 aa18.36■□□□□ 0.53
SIN3B-206ENST00000595541 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 CADPS2Q86UW7 1296 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 CAPS2Q9BXY5 557 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
SIN3B-206ENST00000595541 ERCC3P19447 782 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 GNGT1P63211 74 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 P2RX5Q93086 422 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 CCDC42Q96M95 316 aa18.35■□□□□ 0.53
SIN3B-206ENST00000595541 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
SIN3B-206ENST00000595541 UBA7P41226 1012 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
SIN3B-206ENST00000595541 SH2D4AQ9H788 454 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 PCDHA13Q9Y5I0 950 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 EIF3HO15372 352 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■■■□ 25.4
SIN3B-206ENST00000595541 IPO7O95373 1038 aaKnown RBP18.34■□□□□ 0.53
SIN3B-206ENST00000595541 CCNE1P24864 410 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 GUCY2CP25092 1073 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 MTIF2P46199 727 aaKnown RBP18.34■□□□□ 0.53
SIN3B-206ENST00000595541 AMOTL1Q8IY63 956 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 OSBPL9Q96SU4 736 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 ITGB4P16144 1822 aa18.34■□□□□ 0.53
SIN3B-206ENST00000595541 FLT1P17948 1338 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 PLCG1P19174 1290 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 PDE4DQ08499 809 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 C2CD5Q86YS7 1000 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 IFIH1Q9BYX4 1025 aaKnown RBP18.33■□□□□ 0.53
SIN3B-206ENST00000595541 PCDHA6Q9UN73 950 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 PCDHA4Q9UN74 947 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 PCDHA8Q9Y5H6 950 aa18.33■□□□□ 0.53
SIN3B-206ENST00000595541 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 EIF4A3P38919 411 aaKnown RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 FBXW10Q5XX13 1052 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 ZSCAN29Q8IWY8 852 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 FNBP4Q8N3X1 1017 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 DHTKD1Q96HY7 919 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 MS4A14Q96JA4 679 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 NUP58Q9BVL2 599 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 TRIM9Q9C026 710 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 SEMA6BQ9H3T3 888 aa18.33■□□□□ 0.52
SIN3B-206ENST00000595541 FAM207AQ9NSI2 230 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-206ENST00000595541 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms