RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 ATP2B2Q01814 1243 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 GRIN2CQ14957 1233 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 WTAPQ15007 396 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 LHX8Q68G74 356 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 BLOC1S2Q6QNY1 142 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 CASC1Q6TDU7 716 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 TMTC3Q6ZXV5 915 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 CCDC144CPQ8IYA2 1237 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 NECAB1Q8N987 351 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 CLEC4DQ8WXI8 215 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 TBC1D5Q92609 795 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP6NLQ92738 828 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 TMEM87BQ96K49 555 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 AIFM3Q96NN9 605 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 RANBP17Q9H2T7 1088 aaKnown RBP7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 RIOX1Q9H6W3 641 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 SLC38A10Q9HBR0 1119 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 HMX1Q9NP08 348 aaPredicted RBP7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 GPCPD1Q9NPB8 672 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 TOMM22Q9NS69 142 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 GJB4Q9NTQ9 266 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 PRR12Q9ULL5 1215 aa7.13□□□□□ -1.27
LDLRAD4-213ENST00000590115 KLF18A0A0U1RQI7 1052 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 TMEM232C9JQI7 657 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 JAK2O60674 1132 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 PFKFB2O60825 505 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 SLC3A2P08195 630 aaKnown RBP7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 BMP3P12645 472 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 NT5C2P49902 561 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP17L24Q0WX57 530 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 KRT32Q14532 448 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 FAM110CQ1W6H9 321 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 MUM1L1Q5H9M0 696 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 IFIT1BQ5T764 474 aaKnown RBP7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 AMOTL1Q8IY63 956 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 ADGRF4Q8IZF3 695 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 ANKRD13CQ8N6S4 541 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 DCAF4Q8WV16 495 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 LPAR1Q92633 364 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 AGBL1Q96MI9 1066 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 NECAB3Q96P71 396 aaPredicted RBP7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 PURBQ96QR8 312 aaKnown RBP7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 UHRF1Q96T88 793 aaPredicted RBP7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 TRIM34Q9BYJ4 488 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 AS3MTQ9HBK9 375 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 ARHGEF10LQ9HCE6 1279 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 PDRG1Q9NUG6 133 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 COL20A1Q9P218 1284 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 MTMR7Q9Y216 660 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 CFAP54Q96N23 3096 aa7.12□□□□□ -1.27
LDLRAD4-213ENST00000590115 ZNF236Q9UL36 1845 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 RBAK-RBAKDNI3L0D1 243 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 ATP2A1O14983 1001 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 DDAH1O94760 285 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 PRKAR2AP13861 404 aaKnown RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 CCND3P30281 292 aaPredicted RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 NEK4P51957 841 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 CCT2P78371 535 aaKnown RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 QRICH1Q2TAL8 776 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 RNF20Q5VTR2 975 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 RALYLQ86SE5 291 aaKnown RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 ATXN2LQ8WWM7 1075 aaKnown RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 COA7Q96BR5 231 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 ASB2Q96Q27 587 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 PIGSQ96S52 555 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 MAP3K14Q99558 947 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 MOV10L1Q9BXT6 1211 aaKnown RBP7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
LDLRAD4-213ENST00000590115 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 KLRF2D3W0D1 207 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 NFIBO00712 420 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 COBLO75128 1261 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 ZKSCAN1P17029 563 aaPredicted RBP7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 SLC1A4P43007 532 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 USP14P54578 494 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 ERVK-9P63128 1117 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 ERVK-24P63145 666 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 GHRHRQ02643 423 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 CUL4AQ13619 759 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 COG2Q14746 738 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 MORN1Q5T089 497 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 NOL8Q76FK4 1167 aaKnown RBP7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 FASTKD5Q7L8L6 764 aaKnown RBP7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 MICU3Q86XE3 530 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 IQCA1Q86XH1 822 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 NSUN7Q8NE18 718 aaKnown RBP7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 SMARCC2Q8TAQ2 1214 aa7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 SMCR8Q8TEV9 937 aaPredicted RBP7.1□□□□□ -1.27
LDLRAD4-213ENST00000590115 PHKBQ93100 1093 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms