RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 TEX13BQ9BXU2 312 aa15.73■□□□□ 0.11
ITGB4-209ENST00000583327 SPATC1LQ9H0A9 340 aa15.73■□□□□ 0.11
ITGB4-209ENST00000583327 BAZ2BQ9UIF8 2168 aaKnown RBP15.73■□□□□ 0.11
ITGB4-209ENST00000583327 THSD7BQ9C0I4 1608 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 CA12O43570 354 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 ALDH1A1P00352 501 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 BCRP11274 1271 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
ITGB4-209ENST00000583327 PKP1Q13835 747 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 C17orf99Q6UX52 265 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 CPXCR1Q8N123 301 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 CCDC148Q8NFR7 591 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 TNFRSF25Q93038 417 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 RIC8AQ9NPQ8 531 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 CCPG1Q9ULG6 757 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 KCNJ14Q9UNX9 436 aa15.72■□□□□ 0.11
ITGB4-209ENST00000583327 MRPL11Q9Y3B7 192 aaKnown RBP15.72■□□□□ 0.11
ITGB4-209ENST00000583327 PIK3CDO00329 1044 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 MEIS2O14770 477 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 TLR2O60603 784 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 PEX10O60683 326 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 U2AF2P26368 475 aaKnown RBP eCLIP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 CALML3P27482 149 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 NAPAP54920 295 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 SHCBP1Q8NEM2 672 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 MOV10L1Q9BXT6 1211 aaKnown RBP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 MAP3K20Q9NYL2 800 aaKnown RBP15.71■□□□□ 0.11
ITGB4-209ENST00000583327 PCDHA4Q9UN74 947 aa15.71■□□□□ 0.11
ITGB4-209ENST00000583327 COL11A1P12107 1806 aaPredicted RBP15.71■□□□□ 0.1
ITGB4-209ENST00000583327 MYH6P13533 1939 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 SLC25A27O95847 323 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 GNA11P29992 359 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 HSD17B4P51659 736 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 MRPL12P52815 198 aaKnown RBP15.7■□□□□ 0.1
ITGB4-209ENST00000583327 NLRP5P59047 1200 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 ERVK-9P63128 1117 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 ERVK-24P63145 666 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 NUCB2P80303 420 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 GUCY1B3Q02153 619 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 TRIM29Q14134 588 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 TAF1CQ15572 869 aaPredicted RBP15.7■□□□□ 0.1
ITGB4-209ENST00000583327 FAM110CQ1W6H9 321 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 USH1GQ495M9 461 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 MUM1L1Q5H9M0 696 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 SNRNP48Q6IEG0 339 aaKnown RBP15.7■□□□□ 0.1
ITGB4-209ENST00000583327 BLIDQ8IZY5 108 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 CHST13Q8NET6 341 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 GPRC5AQ8NFJ5 357 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 TBC1D5Q92609 795 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 GLT8D2Q9H1C3 349 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 FOXP1Q9H334 677 aaPredicted RBP15.7■□□□□ 0.1
ITGB4-209ENST00000583327 R3HDMLQ9H3Y0 253 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 PSTPIP2Q9H939 334 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
ITGB4-209ENST00000583327 CTDP1Q9Y5B0 961 aaPredicted RBP15.7■□□□□ 0.1
ITGB4-209ENST00000583327 BTBD18B2RXH4 712 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 ZSCAN22P10073 491 aaPredicted RBP15.69■□□□□ 0.1
ITGB4-209ENST00000583327 ALAS1P13196 640 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 COPB2P35606 906 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 GRM1Q13255 1194 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 CRHR2Q13324 411 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 DIS3L2Q8IYB7 885 aaKnown RBP15.69■□□□□ 0.1
ITGB4-209ENST00000583327 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 OXER1Q8TDS5 423 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 SMCR8Q8TEV9 937 aaPredicted RBP15.69■□□□□ 0.1
ITGB4-209ENST00000583327 ZFYVE28Q9HCC9 887 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 CHMP5Q9NZZ3 219 aa15.69■□□□□ 0.1
ITGB4-209ENST00000583327 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 H3BQV1 296 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 NFIBO00712 420 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 ADCY7P51828 1080 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 RESTQ13127 1097 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 MCF2L2Q86YR7 1114 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 BICD2Q8TD16 824 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 CUL5Q93034 780 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 PAGR1Q9BTK6 254 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 MROH8Q9H579 483 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 RNF146Q9NTX7 359 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 PCDHA6Q9UN73 950 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 PCDHA8Q9Y5H6 950 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 SMCHD1A6NHR9 2005 aa15.68■□□□□ 0.1
ITGB4-209ENST00000583327 ERCC3P19447 782 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 KRT2P35908 639 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 FOSBP53539 338 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 MCTP2Q6DN12 878 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 PORCNQ9H237 461 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 ZSCAN16Q9H4T2 348 aaPredicted RBP15.67■□□□□ 0.1
ITGB4-209ENST00000583327 ACAD9Q9H845 621 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 RNF186Q9NXI6 227 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 FBXO40Q9UH90 709 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 CPA4Q9UI42 421 aa15.67■□□□□ 0.1
ITGB4-209ENST00000583327 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
ITGB4-209ENST00000583327 EDIL3O43854 480 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms