RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PGK1P00558 417 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 NEFLP07196 543 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 BAATQ14032 418 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-220ENST00000581707 CHRDL2Q6WN34 429 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 RNF180Q86T96 592 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 ADGRF4Q8IZF3 695 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 CLEC4DQ8WXI8 215 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 ATN1P54259 1190 aaPredicted RBP22.77■■□□□ 1.24
SREBF1-220ENST00000581707 SART3Q15020 963 aaKnown RBP22.77■■□□□ 1.24
SREBF1-220ENST00000581707 CHST3Q7LGC8 479 aa22.77■■□□□ 1.24
SREBF1-220ENST00000581707 LENG1Q96BZ8 264 aaPredicted RBP22.77■■□□□ 1.24
SREBF1-220ENST00000581707 ANO2Q9NQ90 1003 aa22.77■■□□□ 1.24
SREBF1-220ENST00000581707 PTPDC1A2A3K4 754 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 ADCYAP1R1P41586 468 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 WTAPQ15007 396 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 CDC37Q16543 378 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-220ENST00000581707 CCDC144BQ3MJ40 725 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 USH1GQ495M9 461 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 KATNBL1Q9H079 304 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 ZMYND8Q9ULU4 1186 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-220ENST00000581707 ASTN1O14525 1302 aa22.76■■□□□ 1.23
SREBF1-220ENST00000581707 TRIOBPQ9H2D6 2365 aa22.75■■□□□ 1.23
SREBF1-220ENST00000581707 LCTP09848 1927 aa22.75■■□□□ 1.23
SREBF1-220ENST00000581707 DHX16O60231 1041 aaKnown RBP22.75■■□□□ 1.23
SREBF1-220ENST00000581707 DUSP11O75319 330 aaKnown RBP22.75■■□□□ 1.23
SREBF1-220ENST00000581707 CASC1Q6TDU7 716 aa22.75■■□□□ 1.23
SREBF1-220ENST00000581707 MB21D2Q8IYB1 491 aaPredicted RBP22.75■■□□□ 1.23
SREBF1-220ENST00000581707 STAG2Q8N3U4 1231 aa22.75■■□□□ 1.23
SREBF1-220ENST00000581707 PURBQ96QR8 312 aaKnown RBP22.75■■□□□ 1.23
SREBF1-220ENST00000581707 VAT1LQ9HCJ6 419 aa22.75■■□□□ 1.23
SREBF1-220ENST00000581707 ADD3Q9UEY8 706 aaKnown RBP22.75■■□□□ 1.23
SREBF1-220ENST00000581707 MYH6P13533 1939 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 RANBP2P49792 3224 aaKnown RBP22.74■■□□□ 1.23
SREBF1-220ENST00000581707 KLRF2D3W0D1 207 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 SLC27A2O14975 620 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 ADAMTS4O75173 837 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 ANTXR2P58335 489 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 NECTIN1Q15223 517 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 TMEM67Q5HYA8 995 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 SLC39A5Q6ZMH5 540 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 RNF207Q6ZRF8 634 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 FERMT2Q96AC1 680 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 JMJD4Q9H9V9 463 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 SENP2Q9HC62 589 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 MAD2L2Q9UI95 211 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 PHF24Q9UPV7 400 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 SYNRGQ9UMZ2 1314 aa22.74■■□□□ 1.23
SREBF1-220ENST00000581707 PALM3A6NDB9 673 aaPredicted RBP22.73■■□□□ 1.23
SREBF1-220ENST00000581707 SYN1P17600 705 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 CALML3P27482 149 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 QRICH1Q2TAL8 776 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 CREB3L3Q68CJ9 461 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 SLC30A10Q6XR72 485 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 IGDCC4Q8TDY8 1250 aa22.73■■□□□ 1.23
SREBF1-220ENST00000581707 RBM27Q9P2N5 1060 aaKnown RBP22.73■■□□□ 1.23
SREBF1-220ENST00000581707 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
SREBF1-220ENST00000581707 ADCY6O43306 1168 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 CDC45O75419 566 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 RTP1P59025 263 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 RPS6P62753 249 aaKnown RBP22.72■■□□□ 1.23
SREBF1-220ENST00000581707 FBXO11Q86XK2 927 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 RGS22Q8NE09 1264 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 KLHDC9Q8NEP7 349 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 MORC4Q8TE76 937 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 TSEN34Q9BSV6 310 aaKnown RBP22.72■■□□□ 1.23
SREBF1-220ENST00000581707 PRO3102Q9H379 93 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 ABCB11O95342 1321 aa22.72■■□□□ 1.23
SREBF1-220ENST00000581707 LOC102724159A0A0B4J2E5 919 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 ALDH5A1P51649 535 aaPredicted RBP22.71■■□□□ 1.23
SREBF1-220ENST00000581707 TNFAIP2Q03169 654 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 GRM4Q14833 912 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 PWP2Q15269 919 aaKnown RBP22.71■■□□□ 1.23
SREBF1-220ENST00000581707 EEPD1Q7L9B9 569 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 CATIPQ7Z7H3 387 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 SPC25Q9HBM1 224 aa22.71■■□□□ 1.23
SREBF1-220ENST00000581707 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-220ENST00000581707 C6orf222P0C671 652 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-220ENST00000581707 MCM5P33992 734 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 TROAPQ12815 778 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 KCNA10Q16322 511 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 NOL8Q76FK4 1167 aaKnown RBP22.7■■□□□ 1.22
SREBF1-220ENST00000581707 MTA3Q9BTC8 594 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 UPF3AQ9H1J1 476 aaKnown RBP22.7■■□□□ 1.22
SREBF1-220ENST00000581707 VTA1Q9NP79 307 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 ATP11BQ9Y2G3 1177 aa22.7■■□□□ 1.22
SREBF1-220ENST00000581707 MRPL11Q9Y3B7 192 aaKnown RBP22.7■■□□□ 1.22
SREBF1-220ENST00000581707 BAZ2BQ9UIF8 2168 aaKnown RBP22.69■■□□□ 1.22
SREBF1-220ENST00000581707 LRRC37A2A6NM11 1700 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 PRC1O43663 620 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 ACLYP53396 1101 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 GJA9P57773 515 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 SNX17Q15036 470 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 RNF20Q5VTR2 975 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 IQSEC1Q6DN90 963 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 TAPT1Q6NXT6 567 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 FBXO16Q8IX29 292 aaPredicted RBP22.69■■□□□ 1.22
SREBF1-220ENST00000581707 DNERQ8NFT8 737 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 MTMR8Q96EF0 704 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 MAF1Q9H063 256 aa22.69■■□□□ 1.22
SREBF1-220ENST00000581707 LY9Q9HBG7 655 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms