RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
LITAF-210ENST00000571976 RPTORQ8N122 1335 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 ZBTB5O15062 677 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 ZBTB43O43298 467 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 PRKAR2AP13861 404 aaKnown RBP18.79■□□□□ 0.6
LITAF-210ENST00000571976 RXRAP19793 462 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
LITAF-210ENST00000571976 TRAF1Q13077 416 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 USH1GQ495M9 461 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 MICU3Q86XE3 530 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 AGXT2Q9BYV1 514 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 CYP39A1Q9NYL5 469 aa18.79■□□□□ 0.6
LITAF-210ENST00000571976 ABCB11O95342 1321 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 KLF18A0A0U1RQI7 1052 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 POTEB2H3BUK9 544 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 CYTH3O43739 400 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 GJB1P08034 283 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 TAL1P17542 331 aaPredicted RBP18.78■□□□□ 0.6
LITAF-210ENST00000571976 CYP2C19P33261 490 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 RCAN1P53805 252 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 SLC35G1Q2M3R5 365 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
LITAF-210ENST00000571976 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
LITAF-210ENST00000571976 CLEC4DQ8WXI8 215 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 BRF1Q92994 677 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 SPZ1Q9BXG8 430 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 AMNQ9BXJ7 453 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 MAF1Q9H063 256 aa18.78■□□□□ 0.6
LITAF-210ENST00000571976 PNMA6FA0A0J9YX94 578 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 NFIBO00712 420 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 HOMER1Q86YM7 354 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 RAB11FIP4Q86YS3 637 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 FAM133AQ8N9E0 248 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 RGS22Q8NE09 1264 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 PIGSQ96S52 555 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 TINF2Q9BSI4 451 aa18.77■□□□□ 0.6
LITAF-210ENST00000571976 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.77■□□□□ 0.63e-7■■□□□ 13.1
LITAF-210ENST00000571976 PAK6Q9NQU5 681 aaPredicted RBP18.77■□□□□ 0.6
LITAF-210ENST00000571976 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
LITAF-210ENST00000571976 MRPL11Q9Y3B7 192 aaKnown RBP18.77■□□□□ 0.6
LITAF-210ENST00000571976 CNTN2Q02246 1040 aa18.76■□□□□ 0.59
LITAF-210ENST00000571976 APOBRQ0VD83 1088 aa18.76■□□□□ 0.59
LITAF-210ENST00000571976 PPP2R5BQ15173 497 aa18.76■□□□□ 0.59
LITAF-210ENST00000571976 MAMDC4Q6UXC1 1216 aa18.76■□□□□ 0.59
LITAF-210ENST00000571976 SRBD1Q8N5C6 995 aaKnown RBP18.76■□□□□ 0.59
LITAF-210ENST00000571976 RRP36Q96EU6 259 aaKnown RBP18.76■□□□□ 0.59
LITAF-210ENST00000571976 UPF3BQ9BZI7 483 aaKnown RBP18.76■□□□□ 0.59
LITAF-210ENST00000571976 SMCHD1A6NHR9 2005 aa18.76■□□□□ 0.59
LITAF-210ENST00000571976 PLXNA1Q9UIW2 1896 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 CAPN2P17655 700 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 GJA8P48165 433 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 BAATQ14032 418 aaPredicted RBP18.75■□□□□ 0.59
LITAF-210ENST00000571976 RTN1Q16799 776 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 RNF207Q6ZRF8 634 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 TMTC3Q6ZXV5 915 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 MCF2L2Q86YR7 1114 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 IL17RAQ96F46 866 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 DEFB118Q96PH6 123 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 NRBP1Q9UHY1 535 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
LITAF-210ENST00000571976 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
LITAF-210ENST00000571976 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 RBBP6Q7Z6E9 1792 aaKnown RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 PTPDC1A2A3K4 754 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 GOLGA8AA7E2F4 631 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 GOLGA8BA8MQT2 603 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 PPP1R11O60927 126 aaPredicted RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 SGPL1O95470 568 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 EN2P19622 333 aaPredicted RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 CCND3P30281 292 aaPredicted RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 RGS19P49795 217 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 EVCP57679 992 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 U2AF1L4Q8WU68 220 aaKnown RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 FGD4Q96M96 766 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
LITAF-210ENST00000571976 SEC63Q9UGP8 760 aaKnown RBP18.74■□□□□ 0.59
LITAF-210ENST00000571976 BRCA2P51587 3418 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 MYH6P13533 1939 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 SOWAHBA6NEL2 793 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 CYBAP13498 195 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 METAP2P50579 478 aaKnown RBP eCLIP18.73■□□□□ 0.59
LITAF-210ENST00000571976 RPS6P62753 249 aaKnown RBP18.73■□□□□ 0.59
LITAF-210ENST00000571976 SLC30A10Q6XR72 485 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 PIBF1Q8WXW3 757 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
LITAF-210ENST00000571976 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
LITAF-210ENST00000571976 KIAA0100Q14667 2235 aaKnown RBP18.73■□□□□ 0.59
LITAF-210ENST00000571976 ASB14A6NK59 587 aa18.72■□□□□ 0.59
LITAF-210ENST00000571976 MSCO60682 206 aa18.72■□□□□ 0.59
LITAF-210ENST00000571976 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
LITAF-210ENST00000571976 CALML3P27482 149 aa18.72■□□□□ 0.59
LITAF-210ENST00000571976 CNGA1P29973 690 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms