RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CCDC144CPQ8IYA2 1237 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 KLHDC9Q8NEP7 349 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 MAP4K1Q92918 833 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 FERMT2Q96AC1 680 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 GDF15Q99988 308 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 ESYT1Q9BSJ8 1104 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 KRT23Q9C075 422 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 LSG1Q9H089 658 aaKnown RBP6.34□□□□□ -1.39
CHD3-212ENST00000570758 CNNM2Q9H8M5 875 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 SENP2Q9HC62 589 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 FAM184BQ9ULE4 1060 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 PHF24Q9UPV7 400 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 U3KPZ7 1027 aaPredicted RBP6.34□□□□□ -1.39
CHD3-212ENST00000570758 LCTP09848 1927 aa6.34□□□□□ -1.39
CHD3-212ENST00000570758 MCM3APO60318 1980 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 WDR19Q8NEZ3 1342 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 CTAGE5O15320 804 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 DUSP11O75319 330 aaKnown RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 MAGEA10P43363 369 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 ANTXR2P58335 489 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 COL9A3Q14050 684 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 SNX17Q15036 470 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 CDC37Q16543 378 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 SLC35G1Q2M3R5 365 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 TRIM60Q495X7 471 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 ASPRV1Q53RT3 343 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 TMEM63BQ5T3F8 832 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 IFIT1BQ5T764 474 aaKnown RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 CHST3Q7LGC8 479 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 RNF180Q86T96 592 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 FBXO16Q8IX29 292 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 ADGRF4Q8IZF3 695 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 STAG2Q8N3U4 1231 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 MORC4Q8TE76 937 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 UBAC1Q9BSL1 405 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 UPF3AQ9H1J1 476 aaKnown RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 ABHD16BQ9H3Z7 469 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 JMJD4Q9H9V9 463 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 GPHNQ9NQX3 736 aaPredicted RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 PDGFCQ9NRA1 345 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 ATP11BQ9Y2G3 1177 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 RBM8AQ9Y5S9 174 aaKnown RBP6.33□□□□□ -1.4
CHD3-212ENST00000570758 LRRC37A2A6NM11 1700 aa6.33□□□□□ -1.4
CHD3-212ENST00000570758 A0A1W2PQ45 241 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 A0A1W2PQY0 241 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 PALM3A6NDB9 673 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 ASB14A6NK59 587 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 IFIT3O14879 490 aaKnown RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 SLC27A2O14975 620 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 PPP1R11O60927 126 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 PARP1P09874 1014 aaKnown RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 C6orf222P0C671 652 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 SMPD1P17405 629 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 CALML3P27482 149 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 CST5P28325 142 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 BMP8BP34820 402 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 ALDH5A1P51649 535 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 ACLYP53396 1101 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 GJA9P57773 515 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 RPS6P62753 249 aaKnown RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 MDM2Q00987 491 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 BEX3Q00994 111 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 TLE2Q04725 743 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 TRDNQ13061 729 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 KCNA10Q16322 511 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 QRICH1Q2TAL8 776 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 USH1GQ495M9 461 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 BMP2KLQ5H9B9 411 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 TAPT1Q6NXT6 567 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 RNF207Q6ZRF8 634 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 SH3RF1Q7Z6J0 888 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 MB21D2Q8IYB1 491 aaPredicted RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 TBC1D5Q92609 795 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 VAT1LQ9HCJ6 419 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 MAD2L2Q9UI95 211 aa6.32□□□□□ -1.4
CHD3-212ENST00000570758 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
CHD3-212ENST00000570758 PTPDC1A2A3K4 754 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 TRIM43BA6NCK2 446 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 MOXD2PA6NHM9 499 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 KLRF2D3W0D1 207 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 SOX1O00570 391 aaPredicted RBP6.31□□□□□ -1.4
CHD3-212ENST00000570758 DYNC1LI2O43237 492 aaPredicted RBP6.31□□□□□ -1.4
CHD3-212ENST00000570758 CYTH3O43739 400 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 EDNRBP24530 442 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 NKX3-2P78367 333 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 TNFAIP2Q03169 654 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 GRM4Q14833 912 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 WTAPQ15007 396 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 NECTIN1Q15223 517 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 TMEM67Q5HYA8 995 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 GNASQ5JWF2 1037 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 C1orf53Q5VUE5 145 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 CREB3L3Q68CJ9 461 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 IQSEC1Q6DN90 963 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 KIAA1211Q6ZU35 1233 aa6.31□□□□□ -1.4
CHD3-212ENST00000570758 NOL8Q76FK4 1167 aaKnown RBP6.31□□□□□ -1.4
CHD3-212ENST00000570758 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms