RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 EPHB6O15197 1021 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 KRT86O43790 486 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 BMP15O95972 392 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 PBX1P40424 430 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 KIF5AQ12840 1032 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 TRMT1LQ7Z2T5 733 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 POTEDQ86YR6 584 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 ATRNO75882 1429 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 SMCO2A6NFE2 343 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 KLRF2D3W0D1 207 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 GNPATO15228 680 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 GGCXP38435 758 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 RPS8P62241 208 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 NAALADL2Q58DX5 795 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 MS4A14Q96JA4 679 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 LIMA1Q9UHB6 759 aaKnown RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 FEZ2Q9UHY8 353 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 L1RE1Q9UN81 338 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 ZNF652Q9Y2D9 606 aa10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 COL1A1P02452 1464 aaPredicted RBP10.01□□□□□ -0.81
HDGFL3-206ENST00000568294 DDAH1O94760 285 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 ACTN2P35609 894 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 CYLC1P35663 651 aaPredicted RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 GUCY2FP51841 1108 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 RASSF7Q02833 373 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 WHAMMP3Q1A5X7 153 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 NLRP3Q96P20 1036 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 PIGSQ96S52 555 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 GOLPH3Q9H4A6 298 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 IL17RBQ9NRM6 502 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 PCDHA6Q9UN73 950 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 PCDHA4Q9UN74 947 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 SAMM50Q9Y512 469 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 PCDHA8Q9Y5H6 950 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 CAPN6Q9Y6Q1 641 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 LGALS16A8MUM7 142 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 MPHOSPH10O00566 681 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 CYTH3O43739 400 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 ZEB2O60315 1214 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 LDHBP07195 334 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 UBE2SQ16763 222 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 PARP10Q53GL7 1025 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 WDR59Q6PJI9 974 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 ADSSL1Q8N142 457 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 SECISBP2LQ93073 1101 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 RUFY1Q96T51 708 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 C4AP0C0L4 1744 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 C4BP0C0L5 1744 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 SPTY2D1Q68D10 685 aaPredicted RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 MARCH10Q8NA82 808 aaPredicted RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 TBCKQ8TEA7 893 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 TNFRSF25Q93038 417 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 RASSF4Q9H2L5 321 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 ACBD3Q9H3P7 528 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 SEC63Q9UGP8 760 aaKnown RBP10□□□□□ -0.81
HDGFL3-206ENST00000568294 USP54Q70EL1 1684 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 TNS2Q63HR2 1409 aa10□□□□□ -0.81
HDGFL3-206ENST00000568294 ZSCAN5CA6NGD5 496 aaPredicted RBP9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 H7C1D1 291 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 FTCDO95954 541 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 CALML3P27482 149 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 SLC16A2P36021 539 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 EIF4A3P38919 411 aaKnown RBP9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 GFPT1Q06210 699 aaPredicted RBP9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 RCSD1Q6JBY9 416 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 SETDB2Q96T68 719 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 GBP3Q9H0R5 595 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 TDP2O95551 362 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 NFIXQ14938 502 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 SLC35G1Q2M3R5 365 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 CCDC40Q4G0X9 1142 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 SH2D3CQ8N5H7 860 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 TMEM47Q9BQJ4 181 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 LRRC1Q9BTT6 524 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 GLI3P10071 1580 aa9.99□□□□□ -0.81
HDGFL3-206ENST00000568294 BCL9O00512 1426 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 CCT5P48643 541 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 P2RX5Q93086 422 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 EXOC4Q96A65 974 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 CCDC51Q96ER9 411 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 SELENOOQ9BVL4 669 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 BRIP1Q9BX63 1249 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 ZNF804BA4D1E1 1349 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 AKAP11Q9UKA4 1901 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 MAP2K7O14733 419 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 KRT18P05783 430 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 TAL1P17542 331 aaPredicted RBP9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 LONP1P36776 959 aaKnown RBP9.98□□□□□ -0.81
HDGFL3-206ENST00000568294 SNAP25P60880 206 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms