RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 RANBP2P49792 3224 aaKnown RBP29.62■■■□□ 2.33
AC009041.3-201ENST00000564390 TRIOBPQ9H2D6 2365 aa29.62■■■□□ 2.33
AC009041.3-201ENST00000564390 ADAMTS4O75173 837 aa29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 MAGEA10P43363 369 aaPredicted RBP29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 CCDC144BQ3MJ40 725 aa29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 CENPQQ7L2Z9 268 aaPredicted RBP29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 RNF180Q86T96 592 aa29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 KATNBL1Q9H079 304 aa29.61■■■□□ 2.33
AC009041.3-201ENST00000564390 IRX5P78411 483 aaPredicted RBP29.6■■■□□ 2.33
AC009041.3-201ENST00000564390 IFIT1BQ5T764 474 aaKnown RBP29.6■■■□□ 2.33
AC009041.3-201ENST00000564390 SLC39A5Q6ZMH5 540 aa29.6■■■□□ 2.33
AC009041.3-201ENST00000564390 GDF15Q99988 308 aa29.6■■■□□ 2.33
AC009041.3-201ENST00000564390 PHF24Q9UPV7 400 aa29.6■■■□□ 2.33
AC009041.3-201ENST00000564390 TRDNQ13061 729 aa29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 BAATQ14032 418 aaPredicted RBP29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 SEC23AQ15436 765 aa29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 USH1GQ495M9 461 aa29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 SLC30A10Q6XR72 485 aa29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 CLEC4DQ8WXI8 215 aa29.59■■■□□ 2.33
AC009041.3-201ENST00000564390 PTPDC1A2A3K4 754 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 MYADML2A6NDP7 307 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 ASB14A6NK59 587 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 TRIM60Q495X7 471 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 ASPRV1Q53RT3 343 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 STOX1Q6ZVD7 989 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 WDR19Q8NEZ3 1342 aa29.58■■■□□ 2.33
AC009041.3-201ENST00000564390 DUSP11O75319 330 aaKnown RBP29.57■■■□□ 2.32
AC009041.3-201ENST00000564390 CDC37Q16543 378 aaPredicted RBP29.57■■■□□ 2.32
AC009041.3-201ENST00000564390 RBM8AQ9Y5S9 174 aaKnown RBP29.57■■■□□ 2.32
AC009041.3-201ENST00000564390 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 A0A1W2PQ45 241 aaPredicted RBP29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 A0A1W2PQY0 241 aa29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 E7EWF7 191 aa29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 PARP1P09874 1014 aaKnown RBP29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 EEPD1Q7L9B9 569 aa29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 RALYLQ86SE5 291 aaKnown RBP29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 FBXO16Q8IX29 292 aaPredicted RBP29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 ADGRF4Q8IZF3 695 aa29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 MAP4K1Q92918 833 aa29.56■■■□□ 2.32
AC009041.3-201ENST00000564390 DHX16O60231 1041 aaKnown RBP29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 C6orf222P0C671 652 aaPredicted RBP29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 CALML3P27482 149 aa29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 MDM2Q00987 491 aaPredicted RBP29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 SNX17Q15036 470 aa29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 LTBP2Q14767 1821 aa29.55■■■□□ 2.32
AC009041.3-201ENST00000564390 PTGS1P23219 599 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 RNF207Q6ZRF8 634 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 CHST3Q7LGC8 479 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 STAG2Q8N3U4 1231 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 KLHDC9Q8NEP7 349 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 ESYT1Q9BSJ8 1104 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 SENP2Q9HC62 589 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 PNMA2Q9UL42 364 aa29.54■■■□□ 2.32
AC009041.3-201ENST00000564390 IFIT3O14879 490 aaKnown RBP29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 ALDH5A1P51649 535 aaPredicted RBP29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 ACLYP53396 1101 aa29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 KCNA10Q16322 511 aa29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 NOL8Q76FK4 1167 aaKnown RBP29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 NCOA7Q8NI08 942 aa29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 VAT1LQ9HCJ6 419 aa29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 PRDM5Q9NQX1 630 aaPredicted RBP29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 PDGFCQ9NRA1 345 aa29.53■■■□□ 2.32
AC009041.3-201ENST00000564390 BMP8BP34820 402 aa29.52■■■□□ 2.32
AC009041.3-201ENST00000564390 TNFAIP2Q03169 654 aa29.52■■■□□ 2.32
AC009041.3-201ENST00000564390 KIAA1211Q6ZU35 1233 aa29.52■■■□□ 2.32
AC009041.3-201ENST00000564390 LSG1Q9H089 658 aaKnown RBP29.52■■■□□ 2.32
AC009041.3-201ENST00000564390 UPF3AQ9H1J1 476 aaKnown RBP29.52■■■□□ 2.32
AC009041.3-201ENST00000564390 A0A1W2PPC1 479 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 RPS6P62753 249 aaKnown RBP29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 QRICH1Q2TAL8 776 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 BMP2KLQ5H9B9 411 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 CCSAPQ6IQ19 270 aaPredicted RBP29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 TSEN34Q9BSV6 310 aaKnown RBP29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 UBE2OQ9C0C9 1292 aaKnown RBP29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 JMJD4Q9H9V9 463 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 ADD3Q9UEY8 706 aaKnown RBP29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 PRKAG2Q9UGJ0 569 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 MYH6P13533 1939 aa29.51■■■□□ 2.31
AC009041.3-201ENST00000564390 CST5P28325 142 aaPredicted RBP29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 GJA9P57773 515 aa29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 ANTXR2P58335 489 aa29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 TMEM63BQ5T3F8 832 aa29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 MORC4Q8TE76 937 aa29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 SPC25Q9HBM1 224 aa29.5■■■□□ 2.31
AC009041.3-201ENST00000564390 ERICH2A1L162 156 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 MOXD2PA6NHM9 499 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 BEX3Q00994 111 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 TLE2Q04725 743 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 WTAPQ15007 396 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 TAPT1Q6NXT6 567 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 TLK2Q86UE8 772 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 MB21D2Q8IYB1 491 aaPredicted RBP29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 STARD7Q9NQZ5 370 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 PDLIM7Q9NR12 457 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 MAD2L2Q9UI95 211 aa29.49■■■□□ 2.31
AC009041.3-201ENST00000564390 ABCB11O95342 1321 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 KLRF2D3W0D1 207 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 SOX1O00570 391 aaPredicted RBP29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 CTAGE5O15320 804 aa29.48■■■□□ 2.31
AC009041.3-201ENST00000564390 PQBP1O60828 265 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms