RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 GUCY1A2P33402 732 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 MCM5P33992 734 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 LIFRP42702 1097 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 TTLL12Q14166 644 aaPredicted RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 RRP1BQ14684 758 aaKnown RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SEC23AQ15436 765 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SUPT20HL1Q3ZLR7 823 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 NOL9Q5SY16 702 aaKnown RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 NBPF12Q5TAG4 269 aaPredicted RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 RCSD1Q6JBY9 416 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 CYB5R4Q7L1T6 521 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 KRT26Q7Z3Y9 468 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SGMS1Q86VZ5 419 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SIAH1Q8IUQ4 282 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SLC44A5Q8NCS7 719 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 ESR2Q92731 530 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 MKL1Q969V6 931 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 DCPSQ96C86 337 aaKnown RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 TMEM87BQ96K49 555 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 JAKMIP1Q96N16 626 aaKnown RBP6.45□□□□□ -1.38
ZEB1-220ENST00000560909 SYNPO2Q9UMS6 1093 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 CYP46A1Q9Y6A2 500 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 NEDD4P46934 1319 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 CDK5RAP2Q96SN8 1893 aa6.45□□□□□ -1.38
ZEB1-220ENST00000560909 B4E1Z4 1266 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 CTNND1O60716 968 aaKnown RBP6.44□□□□□ -1.38
ZEB1-220ENST00000560909 USP2O75604 605 aaPredicted RBP6.44□□□□□ -1.38
ZEB1-220ENST00000560909 CASTP20810 708 aaKnown RBP6.44□□□□□ -1.38
ZEB1-220ENST00000560909 CAP2P40123 477 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 RCAN1P53805 252 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 TRDNQ13061 729 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 CCDC178Q5BJE1 867 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 LDLRAD1Q5T700 205 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 DCAF15Q66K64 600 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 BLOC1S2Q6QNY1 142 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 USP48Q86UV5 1035 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 DGKHQ86XP1 1220 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
ZEB1-220ENST00000560909 TMTC2Q8N394 836 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.44□□□□□ -1.38
ZEB1-220ENST00000560909 CDCA5Q96FF9 252 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 ZNF341Q9BYN7 854 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 IL17RBQ9NRM6 502 aa6.44□□□□□ -1.38
ZEB1-220ENST00000560909 SIPA1L1O43166 1804 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 ECM29Q5VYK3 1845 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 ADM5C9JUS6 153 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 SH2B2O14492 632 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 PRC1O43663 620 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 PRDM1O75626 825 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 H2AFB1P0C5Y9 115 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 AKR1B1P15121 316 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 MCM2P49736 904 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 NEK4P51957 841 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 FKBP1BP68106 108 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 TFAP4Q01664 338 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 TOB2Q14106 344 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 CERKLQ49MI3 558 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 SLCO4C1Q6ZQN7 724 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 TMEM179Q6ZVK1 233 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 ENAHQ8N8S7 591 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 GAS2L1Q99501 681 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 MAP3K14Q99558 947 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 WDR18Q9BV38 432 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 GLIS2Q9BZE0 524 aaPredicted RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 UPF3BQ9BZI7 483 aaKnown RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 KANSL2Q9H9L4 492 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 LY9Q9HBG7 655 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 MKNK2Q9HBH9 465 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 PDRG1Q9NUG6 133 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 MTMR4Q9NYA4 1195 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 NYAP2Q9P242 653 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 PCDHGC3Q9UN70 934 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 SCAF8Q9UPN6 1271 aaKnown RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 RBM19Q9Y4C8 960 aaKnown RBP6.43□□□□□ -1.38
ZEB1-220ENST00000560909 PASKQ96RG2 1323 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 LAMA4Q16363 1823 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 NID2Q14112 1375 aa6.43□□□□□ -1.38
ZEB1-220ENST00000560909 BAZ2AQ9UIF9 1905 aaKnown RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 FAM196BA6NMK8 535 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 PPP1R12BO60237 982 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 RANBP6O60518 1105 aaKnown RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ASNSP08243 561 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 SNHG28P0DPA3 235 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 CPA1P15085 419 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 SSTR3P32745 418 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 TROAPQ12815 778 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ANKRD1Q15327 319 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 ABCB5Q2M3G0 1257 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 EAPPQ56P03 285 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 FAM47AQ5JRC9 791 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 PRAMEF18Q5VWM3 479 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 CST9Q5W186 159 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 MAP1SQ66K74 1059 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 DLK2Q6UY11 383 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.42□□□□□ -1.38
ZEB1-220ENST00000560909 MIGA2Q7L4E1 593 aa6.42□□□□□ -1.38
ZEB1-220ENST00000560909 RALYLQ86SE5 291 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms