RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 RRP36Q96EU6 259 aaKnown RBP12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 MMP19Q99542 508 aa12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 MRPL11Q9Y3B7 192 aaKnown RBP12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
SNRPCP18-201ENST00000560619 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 DHX16O60231 1041 aaKnown RBP12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 ADCY3O60266 1144 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 ADORA2AP29274 412 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 GRK4P32298 578 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 APOBRQ0VD83 1088 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 WDR78Q5VTH9 848 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 MYL10Q9BUA6 226 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 NRBP1Q9UHY1 535 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
SNRPCP18-201ENST00000560619 GOLGA8AA7E2F4 631 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 GOLGA8BA8MQT2 603 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 ALAS1P13196 640 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 UBXN2AP68543 259 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 FUT2Q10981 343 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 SLC35G1Q2M3R5 365 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 FAM177A1Q8N128 213 aaPredicted RBP12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 CLEC4DQ8WXI8 215 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 DDX11Q96FC9 970 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 SEC63Q9UGP8 760 aaKnown RBP12.9□□□□□ -0.34
SNRPCP18-201ENST00000560619 PFKFB2O60825 505 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 HMGCRP04035 888 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 IFNAR1P17181 557 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 CDC27P30260 824 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 MCM2P49736 904 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 NTRK3Q16288 839 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 SLC9C1Q4G0N8 1177 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 SNX21Q969T3 373 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 PIGSQ96S52 555 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 A1CFQ9NQ94 594 aaKnown RBP12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 CYP39A1Q9NYL5 469 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
SNRPCP18-201ENST00000560619 PRPF3O43395 683 aaKnown RBP12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 COBLO75128 1261 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 PLEKHA8P1O95397 391 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 RXRAP19793 462 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 CYP2B6P20813 491 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 AK2P54819 239 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 SNAP25P60880 206 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 MAP3K21Q5TCX8 1036 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 DNERQ8NFT8 737 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 ADD3Q9UEY8 706 aaKnown RBP12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
SNRPCP18-201ENST00000560619 B4DLN1 442 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 PIK3CDO00329 1044 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 CDKL5O76039 1030 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 MRPL12P52815 198 aaKnown RBP12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 CCDC144CPQ8IYA2 1237 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 NPLOC4Q8TAT6 608 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 MORC4Q8TE76 937 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 TRIB2Q92519 343 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 MPHOSPH6Q99547 160 aaKnown RBP12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 SLKQ9H2G2 1235 aaPredicted RBP12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
SNRPCP18-201ENST00000560619 ASB14A6NK59 587 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 K7ELQ4 463 aaPredicted RBP12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 NFIBO00712 420 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 CPLX1O14810 134 aa12.86□□□□□ -0.35
SNRPCP18-201ENST00000560619 HSD17B4P51659 736 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms