RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 LRRC26Q2I0M4 334 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 ASPRV1Q53RT3 343 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 ARMCX2Q7L311 632 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 SENP6Q9GZR1 1112 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 KATNBL1Q9H079 304 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 ZHX1Q9UKY1 873 aaPredicted RBP13.62□□□□□ -0.23
RABGGTA-216ENST00000560243 DNM1LO00429 736 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 CDC45O75419 566 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 LRRC41Q15345 812 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 CDC37Q16543 378 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 USH1GQ495M9 461 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 TMEM67Q5HYA8 995 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 SLC30A10Q6XR72 485 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 IGDCC4Q8TDY8 1250 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 JMJD4Q9H9V9 463 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 XPNPEP3Q9NQH7 507 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 MAD2L2Q9UI95 211 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 NR2E3Q9Y5X4 410 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
RABGGTA-216ENST00000560243 KLRF2D3W0D1 207 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 DHX16O60231 1041 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 RARBP10826 455 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 AKR1A1P14550 325 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 PTGS1P23219 599 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 WTAPQ15007 396 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 QRICH1Q2TAL8 776 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 ARRDC4Q8NCT1 418 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 TBC1D5Q92609 795 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 ZMYND8Q9ULU4 1186 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 COLQQ9Y215 455 aaPredicted RBP13.6□□□□□ -0.23
RABGGTA-216ENST00000560243 ERICH2A1L162 156 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 PTPDC1A2A3K4 754 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 PALM3A6NDB9 673 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 PRC1O43663 620 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 CALML3P27482 149 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 TROAPQ12815 778 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 GRM4Q14833 912 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 EEPD1Q7L9B9 569 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 LY9Q9HBG7 655 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
RABGGTA-216ENST00000560243 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 MYADML2A6NDP7 307 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 KBTBD13C9JR72 458 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 PPP1R11O60927 126 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 SYN1P17600 705 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 RNF207Q6ZRF8 634 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 MYL10Q9BUA6 226 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 LRRC2Q9BYS8 371 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
RABGGTA-216ENST00000560243 ASB14A6NK59 587 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 SH2B2O14492 632 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 CYTH3O43739 400 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 MCM5P33992 734 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 FBXO11Q86XK2 927 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 FBXO16Q8IX29 292 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 COL20A1Q9P218 1284 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 PNMA2Q9UL42 364 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 PHF24Q9UPV7 400 aa13.57□□□□□ -0.24
RABGGTA-216ENST00000560243 OPLAHO14841 1288 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 CTAGE5O15320 804 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 RXRAP19793 462 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 CASC1Q6TDU7 716 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 RNF180Q86T96 592 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 NUP133Q8WUM0 1156 aa13.56□□□□□ -0.24
RABGGTA-216ENST00000560243 TCEANC2Q96MN5 208 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms