RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
CSPG4P5-201ENST00000558731 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 MYH6P13533 1939 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 SPDYE3A6NKU9 549 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 CAVIN2O95810 425 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 VIL1P09327 827 aaKnown RBP12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 UBASH3AP57075 661 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 KANK3Q6NY19 840 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 PAGE5Q96GU1 130 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 ZNF341Q9BYN7 854 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 SH3GLB2Q9NR46 395 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 CNOT7Q9UIV1 285 aaKnown RBP12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 MYH1P12882 1939 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 ENTPD3O75355 529 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 TRAPPC10P48553 1259 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 CUL4BQ13620 913 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 TNIP1Q15025 636 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 DYMQ7RTS9 669 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 CABP7Q86V35 215 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 TANGO6Q9C0B7 1094 aa12.21□□□□□ -0.45
CSPG4P5-201ENST00000558731 DYNC1I1O14576 645 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 GOLGA8FQ08AF8 430 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 GOLGA8DPQ0D2H9 430 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 CPLX3Q8WVH0 158 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 TIGD1Q96MW7 591 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 LRWD1Q9UFC0 647 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 CTNND2Q9UQB3 1225 aa12.21□□□□□ -0.46
CSPG4P5-201ENST00000558731 NFKBIEO00221 500 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 SLFN14P0C7P3 912 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 ASIC1P78348 528 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 IL17AQ16552 155 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 FAM151AQ8WW52 585 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 TRMT1Q9NXH9 659 aaKnown RBP12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 PPP1R11O60927 126 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 TGFB2P61812 414 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 PRR16Q569H4 304 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 CALML4Q96GE6 196 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 EHD4Q9H223 541 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 RIOX1Q9H6W3 641 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 ZBTB21Q9ULJ3 1066 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 FANCCQ00597 558 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 DACH1Q9UI36 760 aa12.2□□□□□ -0.46
CSPG4P5-201ENST00000558731 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 CHMP2AO43633 222 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 SLC37A4O43826 429 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 DDX25Q9UHL0 483 aaKnown RBP12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 H7C1D1 291 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 STAT2P52630 851 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 CCDC144BQ3MJ40 725 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 PLCG1P19174 1290 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
CSPG4P5-201ENST00000558731 CCT6AP40227 531 aaKnown RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 DLK2Q6UY11 383 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 LONP1P36776 959 aaKnown RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 FMR1Q06787 632 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 HERC5Q9UII4 1024 aaKnown RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 BMP6P22004 513 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 KRT79Q5XKE5 535 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 C16orf45Q96MC5 204 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 DISC1Q9NRI5 854 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
CSPG4P5-201ENST00000558731 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 IGKV6D-41A0A0C4DH26 115 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 CCDC47Q96A33 483 aaKnown RBP12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 PRDM4Q9UKN5 801 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 DDX39AO00148 427 aaKnown RBP12.17□□□□□ -0.46
CSPG4P5-201ENST00000558731 INPP5BP32019 993 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms