RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 RAB30Q15771 203 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 CCDC85BQ15834 202 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-218ENST00000555628 KCNA10Q16322 511 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 PSRC1Q6PGN9 363 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-218ENST00000555628 TMED8Q6PL24 325 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-218ENST00000555628 BLOC1S3Q6QNY0 202 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 MAMDC4Q6UXC1 1216 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 MAGEB6Q8N7X4 407 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 SLC43A3Q8NBI5 491 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 SSH3Q8TE77 659 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 MMP19Q99542 508 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 NKX2-4Q9H2Z4 354 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 CABP5Q9NP86 173 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 FBXO28Q9NVF7 368 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 TNNQ9UQP3 1299 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 MROH7Q68CQ1 1323 aa11.06□□□□□ -0.64
PRKCH-218ENST00000555628 SMIM22K7EJ46 135 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 ERC2O15083 957 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 WDR46O15213 610 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 DUSP11O75319 330 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 IDH1O75874 414 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 GNAI2P04899 355 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 TRIM27P14373 513 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 G3BP1Q13283 466 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 PLS1Q14651 629 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 CCDC158Q5M9N0 1113 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 SPICE1Q8N0Z3 855 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 MSL3Q8N5Y2 521 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 EAF2Q96CJ1 260 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 EPHX3Q9H6B9 360 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 IL23AQ9NPF7 189 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
PRKCH-218ENST00000555628 UMODL1Q5DID0 1318 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 USP34Q70CQ2 3546 aa11.05□□□□□ -0.64
PRKCH-218ENST00000555628 ARVCFO00192 962 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 VWA5AO00534 786 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 CYP2D6P10635 497 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 AKR1B1P15121 316 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 GJA9P57773 515 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 CCDC129Q6ZRS4 1044 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
PRKCH-218ENST00000555628 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
PRKCH-218ENST00000555628 COL4A4P53420 1690 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-218ENST00000555628 TCRBV5S4A2TA0A5A2 114 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 ASGR1P07306 291 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 IGFBP4P22692 258 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 CYP2C18P33260 490 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 TMEM199Q8N511 208 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
PRKCH-218ENST00000555628 PPP1R12CQ9BZL4 782 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 WNT8AQ9H1J5 351 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
PRKCH-218ENST00000555628 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 ASTN1O14525 1302 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
PRKCH-218ENST00000555628 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
PRKCH-218ENST00000555628 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 ANP32CO43423 234 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 TLL1O43897 1013 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 MYOGP15173 224 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 STAT3P40763 770 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 ICA1Q05084 483 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 KCTD2Q14681 263 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
PRKCH-218ENST00000555628 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
PRKCH-218ENST00000555628 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRKCH-218ENST00000555628 MCM9Q9NXL9 1143 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 RIPK3Q9Y572 518 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 MTCH2Q9Y6C9 303 aa11.02□□□□□ -0.65
PRKCH-218ENST00000555628 LCTP09848 1927 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 MPHOSPH10O00566 681 aaKnown RBP11.01□□□□□ -0.65
PRKCH-218ENST00000555628 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 GPR37L1O60883 481 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 ARHGEF15O94989 841 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-218ENST00000555628 PDE6AP16499 860 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 COPB2P35606 906 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 RABGGTBP53611 331 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 LCORLQ8N3X6 602 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
PRKCH-218ENST00000555628 SLC28A3Q9HAS3 691 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
PRKCH-218ENST00000555628 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms