RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 LAMA3Q16787 3333 aa11.96□□□□□ -0.5
PSMC1-204ENST00000554624 A6NJR5 290 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 KBTBD13C9JR72 458 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 PRKAB2O43741 272 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 COBLO75128 1261 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 CD2BP2O95400 341 aaKnown RBP11.95□□□□□ -0.5
PSMC1-204ENST00000554624 CYP2D6P10635 497 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 AKR1B1P15121 316 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 COPB2P35606 906 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 FAM109BQ6ICB4 259 aaPredicted RBP11.95□□□□□ -0.5
PSMC1-204ENST00000554624 GIMAP6Q6P9H5 292 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 C16orf86Q6ZW13 317 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 TRPV1Q8NER1 839 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 STXBP5LQ9Y2K9 1186 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
PSMC1-204ENST00000554624 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 MAST2Q6P0Q8 1798 aa11.95□□□□□ -0.5
PSMC1-204ENST00000554624 DLL1O00548 723 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 EEF2P13639 858 aaKnown RBP11.94□□□□□ -0.5
PSMC1-204ENST00000554624 STAT3P40763 770 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 SLC39A5Q6ZMH5 540 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 RIOX2Q8IUF8 465 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 MTMR10Q9NXD2 777 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 GPSM3Q9Y4H4 160 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
PSMC1-204ENST00000554624 DNAH12Q6ZR08 3092 aa11.94□□□□□ -0.5
PSMC1-204ENST00000554624 COL6A3P12111 3177 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 SLC19A1P41440 591 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 WNT7BP56706 349 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 RTP1P59025 263 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 KCTD2Q14681 263 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 SBK1Q52WX2 424 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 GJC2Q5T442 439 aaPredicted RBP11.93□□□□□ -0.5
PSMC1-204ENST00000554624 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 MAML3Q96JK9 1138 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 MKNK2Q9HBH9 465 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 ZNF287Q9HBT7 754 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 ECHDC1Q9NTX5 307 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
PSMC1-204ENST00000554624 VWA5AO00534 786 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 LRRFIP1Q32MZ4 808 aaKnown RBP11.92□□□□□ -0.5
PSMC1-204ENST00000554624 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 MSL3Q8N5Y2 521 aaKnown RBP11.92□□□□□ -0.5
PSMC1-204ENST00000554624 GPATCH3Q96I76 525 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 STRBPQ96SI9 672 aaKnown RBP11.92□□□□□ -0.5
PSMC1-204ENST00000554624 MMP19Q99542 508 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 TINF2Q9BSI4 451 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
PSMC1-204ENST00000554624 GDPD2Q9HCC8 539 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
PSMC1-204ENST00000554624 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 FOCADQ5VW36 1801 aa11.92□□□□□ -0.5
PSMC1-204ENST00000554624 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 ZFYP08048 801 aaPredicted RBP11.91□□□□□ -0.5
PSMC1-204ENST00000554624 RARBP10826 455 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 GNAT2P19087 354 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 SNX17Q15036 470 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 LRRC41Q15345 812 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 RNF180Q86T96 592 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 ZNF444Q8N0Y2 327 aaPredicted RBP11.91□□□□□ -0.5
PSMC1-204ENST00000554624 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
PSMC1-204ENST00000554624 ZNF511Q8NB15 262 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
PSMC1-204ENST00000554624 ZMYND15Q9H091 742 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 NYAP2Q9P242 653 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
PSMC1-204ENST00000554624 MYH1P12882 1939 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 F5H6K3 240 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 GPR37L1O60883 481 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 KLRC3Q07444 240 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 ZNF792Q3KQV3 632 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 Q7L0L9 218 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 BAP1Q92560 729 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
PSMC1-204ENST00000554624 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
PSMC1-204ENST00000554624 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
PSMC1-204ENST00000554624 PATL2C9JE40 543 aaKnown RBP11.89□□□□□ -0.51
PSMC1-204ENST00000554624 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
PSMC1-204ENST00000554624 RNF113AO15541 343 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms