RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CCDC93Q567U6 631 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 CDKAL1Q5VV42 579 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 CCAR2Q8N163 923 aaKnown RBP15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 MTMR9Q96QG7 549 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
RAB3IP-216ENST00000552199 COL2A1P02458 1487 aaPredicted RBP15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 A0A1B0GTH6 734 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 USP27XA6NNY8 438 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 SLC1A4P43007 532 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 MRPL12P52815 198 aaKnown RBP15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 ABCB5Q2M3G0 1257 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 IGSF22Q8N9C0 903 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 CUL5Q93034 780 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 PSMD1Q99460 953 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 PLIN2Q99541 437 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 RWDD2AQ9UIY3 292 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 CTNND2Q9UQB3 1225 aa15.81■□□□□ 0.12
RAB3IP-216ENST00000552199 PLCG1P19174 1290 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 TECP42680 631 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 ICA1Q05084 483 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 SEMA3FQ13275 785 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 KCNB1Q14721 858 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 CALCRLQ16602 461 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 RSBN1LQ6PCB5 846 aaPredicted RBP15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 APTXQ7Z2E3 356 aaKnown RBP15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 KLRC4O43908 158 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 UBE2SQ16763 222 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 PTPN21Q16825 1174 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 SPECC1LQ69YQ0 1117 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 CCDC112Q8NEF3 446 aa15.8■□□□□ 0.12
RAB3IP-216ENST00000552199 ARFGEF1Q9Y6D6 1849 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 RAD21O60216 631 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 GDF11O95390 407 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 TDP2O95551 362 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 VIL1P09327 827 aaKnown RBP15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 TXKP42681 527 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 TNNI2P48788 182 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 PAK1Q13153 545 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 E4F1Q66K89 784 aaPredicted RBP15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 NYAP1Q6ZVC0 841 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 GMCL1P1Q8NEA9 526 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 MMTAG2Q9BU76 263 aaKnown RBP15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 PSTPIP2Q9H939 334 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 TRMT1Q9NXH9 659 aaKnown RBP15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 GDAQ9Y2T3 454 aa15.79■□□□□ 0.12
RAB3IP-216ENST00000552199 PSDA5PKW4 1024 aaPredicted RBP15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 SLC37A4O43826 429 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 KCNA3P22001 575 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 GTF2F1P35269 517 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 PRCPP42785 496 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 RBM26Q5T8P6 1007 aaKnown RBP15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 PPP4R3AQ6IN85 833 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 CTAGE1Q96RT6 745 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 GMLQ99445 158 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 GLT8D2Q9H1C3 349 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 ADD3Q9UEY8 706 aaKnown RBP15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 F5H6K3 240 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 PSMD14O00487 310 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 RAD17O75943 681 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 RHOBTB3O94955 611 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 DPEP1P16444 411 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 BAG6P46379 1132 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 JAG1P78504 1218 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 KLRC3Q07444 240 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 PDIA5Q14554 519 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 PTPN14Q15678 1187 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 TMEM266Q2M3C6 531 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 ADSSL1Q8N142 457 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 GMCL1Q96IK5 515 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 CSRNP1Q96S65 589 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 TMOD2Q9NZR1 351 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
RAB3IP-216ENST00000552199 RIOK3O14730 519 aaKnown RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 COBLO75128 1261 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 GH2P01242 217 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 GOLGA8FQ08AF8 430 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 GOLGA8DPQ0D2H9 430 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 RRP1BQ14684 758 aaKnown RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 CDC37Q16543 378 aaPredicted RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 CEP135Q66GS9 1140 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 CALML4Q96GE6 196 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 ZNF277Q9NRM2 450 aaPredicted RBP15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 LRWD1Q9UFC0 647 aa15.77■□□□□ 0.12
RAB3IP-216ENST00000552199 LIMA1Q9UHB6 759 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms