RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 SOX1O00570 391 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-218ENST00000544373 NFIBO00712 420 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 PTGS1P23219 599 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 MDM2Q00987 491 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-218ENST00000544373 CCDC144BQ3MJ40 725 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 NSMFQ6X4W1 530 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 ANKS1AQ92625 1134 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 PHF24Q9UPV7 400 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 SYNRGQ9UMZ2 1314 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-218ENST00000544373 BMP8BP34820 402 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 RNF180Q86T96 592 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 IQCA1Q86XH1 822 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 PNMA1Q8ND90 353 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
CHEK1-218ENST00000544373 TNKSO95271 1327 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 CYP21A2P08686 494 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 BAATQ14032 418 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-218ENST00000544373 SNX17Q15036 470 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-218ENST00000544373 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 KLHDC9Q8NEP7 349 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 KAT14Q9H8E8 782 aa12.56□□□□□ -0.4
CHEK1-218ENST00000544373 RAD50Q92878 1312 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 A0A1W2PQ45 241 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-218ENST00000544373 A0A1W2PQY0 241 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 SGSM2O43147 1006 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 DUSP11O75319 330 aaKnown RBP12.55□□□□□ -0.4
CHEK1-218ENST00000544373 KCNA10Q16322 511 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 SLC30A10Q6XR72 485 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 EEPD1Q7L9B9 569 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 SH3RF1Q7Z6J0 888 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 KRT23Q9C075 422 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
CHEK1-218ENST00000544373 PDGFCQ9NRA1 345 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
CHEK1-218ENST00000544373 ACLYP53396 1101 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 TLE2Q04725 743 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
CHEK1-218ENST00000544373 FBXO16Q8IX29 292 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-218ENST00000544373 RUFY2Q8WXA3 655 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 SENP2Q9HC62 589 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 TRIM43BA6NCK2 446 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 ASB14A6NK59 587 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-218ENST00000544373 NT5C2P49902 561 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 BEX3Q00994 111 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 SEC23AQ15436 765 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 USH1GQ495M9 461 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 C1orf53Q5VUE5 145 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 TAPT1Q6NXT6 567 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 TRIM43Q96BQ3 446 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-218ENST00000544373 UBAC1Q9BSL1 405 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
CHEK1-218ENST00000544373 PRDM5Q9NQX1 630 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-218ENST00000544373 SMPD1P17405 629 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 ITGB8P26012 769 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 CALML3P27482 149 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 GJA9P57773 515 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 TNFAIP2Q03169 654 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 CHST3Q7LGC8 479 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 STAG2Q8N3U4 1231 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 TBC1D5Q92609 795 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
CHEK1-218ENST00000544373 UPF3AQ9H1J1 476 aaKnown RBP12.53□□□□□ -0.4
CHEK1-218ENST00000544373 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 GNEQ9Y223 722 aaKnown RBP12.53□□□□□ -0.4
CHEK1-218ENST00000544373 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
CHEK1-218ENST00000544373 E7EWF7 191 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 PQBP1O60828 265 aaKnown RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 ASGR1P07306 291 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 COL9A3Q14050 684 aaPredicted RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 GNASQ5JWF2 1037 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 NOL8Q76FK4 1167 aaKnown RBP12.52□□□□□ -0.4
CHEK1-218ENST00000544373 TDHQ8IZJ6 230 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 MAP4K1Q92918 833 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.4
CHEK1-218ENST00000544373 MOXD2PA6NHM9 499 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 PARP1P09874 1014 aaKnown RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 CST5P28325 142 aaPredicted RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 ALDH5A1P51649 535 aaPredicted RBP12.51□□□□□ -0.41
CHEK1-218ENST00000544373 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
CHEK1-218ENST00000544373 QRICH1Q2TAL8 776 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms