RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SYNRGQ9UMZ2 1314 aa12.24□□□□□ -0.45
CAPN1-225ENST00000533704 ASB14A6NK59 587 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 NFIBO00712 420 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 C6orf222P0C671 652 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-225ENST00000533704 PTH1RQ03431 593 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 TRDNQ13061 729 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 USH1GQ495M9 461 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 EEPD1Q7L9B9 569 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 ENAHQ8N8S7 591 aaPredicted RBP12.23□□□□□ -0.45
CAPN1-225ENST00000533704 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
CAPN1-225ENST00000533704 CYP39A1Q9NYL5 469 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 PHF24Q9UPV7 400 aa12.23□□□□□ -0.45
CAPN1-225ENST00000533704 A0A1W2PQ45 241 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 A0A1W2PQY0 241 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 MYADML2A6NDP7 307 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 ADCY6O43306 1168 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 ADAMTS4O75173 837 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 DUSP11O75319 330 aaKnown RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 SNHG28P0DPA3 235 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 CALML3P27482 149 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 GPATCH4Q5T3I0 446 aaKnown RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 IFIT1BQ5T764 474 aaKnown RBP12.22□□□□□ -0.45
CAPN1-225ENST00000533704 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 SPC25Q9HBM1 224 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 VAT1LQ9HCJ6 419 aa12.22□□□□□ -0.45
CAPN1-225ENST00000533704 ASTN1O14525 1302 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 A0A1W2PPC1 479 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
CAPN1-225ENST00000533704 PARP1P09874 1014 aaKnown RBP12.21□□□□□ -0.45
CAPN1-225ENST00000533704 BMP8BP34820 402 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 NT5C2P49902 561 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 ACLYP53396 1101 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 TNFAIP2Q03169 654 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 TLE2Q04725 743 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 KCNA10Q16322 511 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-225ENST00000533704 SLC30A10Q6XR72 485 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 CYB5R4Q7L1T6 521 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 SKAP1Q86WV1 359 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 FBXO16Q8IX29 292 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-225ENST00000533704 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
CAPN1-225ENST00000533704 U3KPZ7 1027 aaPredicted RBP12.21□□□□□ -0.45
CAPN1-225ENST00000533704 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 SGSM2O43147 1006 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 CYP21A2P08686 494 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 BEX3Q00994 111 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 ASPRV1Q53RT3 343 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 RNF207Q6ZRF8 634 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 RALYLQ86SE5 291 aaKnown RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 TSEN34Q9BSV6 310 aaKnown RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 AP5M1Q9H0R1 490 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 PDGFCQ9NRA1 345 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 ADD3Q9UEY8 706 aaKnown RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 TAF6LQ9Y6J9 622 aa12.2□□□□□ -0.46
CAPN1-225ENST00000533704 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
CAPN1-225ENST00000533704 DNAH12Q6ZR08 3092 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 ERICH2A1L162 156 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 MOXD2PA6NHM9 499 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 IFIT3O14879 490 aaKnown RBP12.19□□□□□ -0.46
CAPN1-225ENST00000533704 ASGR1P07306 291 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 PTGS1P23219 599 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 ALDH5A1P51649 535 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-225ENST00000533704 SNX17Q15036 470 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 PCSK9Q8NBP7 692 aaKnown RBP12.19□□□□□ -0.46
CAPN1-225ENST00000533704 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 NUP133Q8WUM0 1156 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 CLEC4DQ8WXI8 215 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 LRCH3Q96II8 777 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 PDLIM7Q9NR12 457 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 RBM8AQ9Y5S9 174 aaKnown RBP12.19□□□□□ -0.46
CAPN1-225ENST00000533704 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
CAPN1-225ENST00000533704 MYH7BA7E2Y1 1941 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 E7EWF7 191 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 DYNC1LI2O43237 492 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-225ENST00000533704 CLTBP09497 229 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 SMPD1P17405 629 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 GJA9P57773 515 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
CAPN1-225ENST00000533704 PDE4DQ08499 809 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 SEC23AQ15436 765 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 CENPQQ7L2Z9 268 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-225ENST00000533704 TLK2Q86UE8 772 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
CAPN1-225ENST00000533704 NCOA7Q8NI08 942 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms