RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MTA3Q9BTC8 594 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 PPP4R2Q9NY27 417 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 NFIBO00712 420 aa30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 ACVR2BQ13705 512 aa30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 CCDC144CPQ8IYA2 1237 aa30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 CLEC4DQ8WXI8 215 aa30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 ZHX1Q9UKY1 873 aaPredicted RBP30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 FAM184BQ9ULE4 1060 aa30.75■■■□□ 2.51
TSPAN4-217ENST00000527644 BAATQ14032 418 aaPredicted RBP30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 GJC2Q5T442 439 aaPredicted RBP30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 RNF20Q5VTR2 975 aa30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 STAG2Q8N3U4 1231 aa30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 SENP2Q9HC62 589 aa30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 XPNPEP3Q9NQH7 507 aa30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 MAD2L2Q9UI95 211 aa30.74■■■□□ 2.51
TSPAN4-217ENST00000527644 PALM3A6NDB9 673 aaPredicted RBP30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 KLRF2D3W0D1 207 aa30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 DHX16O60231 1041 aaKnown RBP30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 MCM5P33992 734 aa30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 JMJD4Q9H9V9 463 aa30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 VAT1LQ9HCJ6 419 aa30.73■■■□□ 2.51
TSPAN4-217ENST00000527644 PTPDC1A2A3K4 754 aa30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 KBTBD13C9JR72 458 aa30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 GRM4Q14833 912 aa30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 LRRC41Q15345 812 aa30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 CATIPQ7Z7H3 387 aa30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 SENP6Q9GZR1 1112 aaPredicted RBP30.72■■■□□ 2.51
TSPAN4-217ENST00000527644 PRC1O43663 620 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 TROAPQ12815 778 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 QRICH1Q2TAL8 776 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 USH1GQ495M9 461 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 RNF207Q6ZRF8 634 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 MAF1Q9H063 256 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 ADD3Q9UEY8 706 aaKnown RBP30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 ASTN1O14525 1302 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 ABCB11O95342 1321 aa30.71■■■□□ 2.51
TSPAN4-217ENST00000527644 MCM3APO60318 1980 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 MYCNP04198 464 aaPredicted RBP30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 TMTC2Q8N394 836 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 RGS22Q8NE09 1264 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 TMEM87BQ96K49 555 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 KATNBL1Q9H079 304 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 LY9Q9HBG7 655 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 ALPK3Q96L96 1907 aa30.7■■■□□ 2.51
TSPAN4-217ENST00000527644 LOC102724159A0A0B4J2E5 919 aa30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 PWP2Q15269 919 aaKnown RBP30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 CCDC144BQ3MJ40 725 aa30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 RNF180Q86T96 592 aa30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 FBXO11Q86XK2 927 aa30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 PURBQ96QR8 312 aaKnown RBP30.69■■■□□ 2.5
TSPAN4-217ENST00000527644 DUSP11O75319 330 aaKnown RBP30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 PGK1P00558 417 aa30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 CALML3P27482 149 aa30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 SLC30A10Q6XR72 485 aa30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 MORC4Q8TE76 937 aa30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 MTMR8Q96EF0 704 aa30.68■■■□□ 2.5
TSPAN4-217ENST00000527644 RPS6P62753 249 aaKnown RBP30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 LRRC26Q2I0M4 334 aa30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 C7orf61Q8IZ16 206 aa30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 LENG1Q96BZ8 264 aaPredicted RBP30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 MAP3K14Q99558 947 aa30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 MRPL11Q9Y3B7 192 aaKnown RBP30.67■■■□□ 2.5
TSPAN4-217ENST00000527644 SH2B2O14492 632 aaPredicted RBP30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 ALDH5A1P51649 535 aaPredicted RBP30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 TSGA10IPQ3SY00 556 aa30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 AMNQ9BXJ7 453 aa30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 RIOX1Q9H6W3 641 aa30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 GPHNQ9NQX3 736 aaPredicted RBP30.66■■■□□ 2.5
TSPAN4-217ENST00000527644 LCTP09848 1927 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 ZBTB5O15062 677 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 ADAMTS4O75173 837 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 DDAH1O94760 285 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 LIFRP42702 1097 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 MCF2L2Q86YR7 1114 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 ZNF654Q8IZM8 581 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 NUP133Q8WUM0 1156 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 PHF24Q9UPV7 400 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 SYNRGQ9UMZ2 1314 aa30.65■■■□□ 2.5
TSPAN4-217ENST00000527644 ADCYAP1R1P41586 468 aa30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 COL9A3Q14050 684 aaPredicted RBP30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 NFXL1Q6ZNB6 911 aa30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 DNERQ8NFT8 737 aa30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 NEK1Q96PY6 1258 aa30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 TSEN34Q9BSV6 310 aaKnown RBP30.64■■■□□ 2.5
TSPAN4-217ENST00000527644 CCDC69A6NI79 296 aa30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 ATN1P54259 1190 aaPredicted RBP30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 KRT32Q14532 448 aa30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 CTCFLQ8NI51 663 aaPredicted RBP30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 MPHOSPH6Q99547 160 aaKnown RBP30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 SPC25Q9HBM1 224 aa30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 VTA1Q9NP79 307 aa30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 DDX49Q9Y6V7 483 aaKnown RBP30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 MYH6P13533 1939 aa30.63■■■□□ 2.49
TSPAN4-217ENST00000527644 ADCY6O43306 1168 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 KIF5BP33176 963 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 TNFAIP2Q03169 654 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 TRAF1Q13077 416 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 SLC35G1Q2M3R5 365 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 SLC39A5Q6ZMH5 540 aa30.62■■■□□ 2.49
TSPAN4-217ENST00000527644 RASEFQ8IZ41 740 aa30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms