RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 PAWRQ96IZ0 340 aaKnown RBP24.36■■□□□ 1.49
TRAPPC9-215ENST00000524162 ABHD16BQ9H3Z7 469 aa24.36■■□□□ 1.49
TRAPPC9-215ENST00000524162 ASB14A6NK59 587 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 PRC1O43663 620 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 SNAI1O95863 264 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 ZNF865P0CJ78 1059 aaPredicted RBP24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 COL6A1P12109 1028 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 SMARCA1P28370 1054 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 CNGA1P29973 690 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 TRAF1Q13077 416 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 ARRDC4Q8NCT1 418 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 CLEC4DQ8WXI8 215 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 UBA5Q9GZZ9 404 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 JMJD4Q9H9V9 463 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 LY9Q9HBG7 655 aa24.35■■□□□ 1.49
TRAPPC9-215ENST00000524162 ALPK3Q96L96 1907 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 DNM1LO00429 736 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 DDAH1O94760 285 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 CDC37Q16543 378 aaPredicted RBP24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 MORC4Q8TE76 937 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 RIOX1Q9H6W3 641 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 ADD3Q9UEY8 706 aaKnown RBP24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 ABCB11O95342 1321 aa24.34■■□□□ 1.49
TRAPPC9-215ENST00000524162 HMGB1P09429 215 aaKnown RBP24.33■■□□□ 1.49
TRAPPC9-215ENST00000524162 AKR1A1P14550 325 aa24.33■■□□□ 1.49
TRAPPC9-215ENST00000524162 CNTN2Q02246 1040 aa24.33■■□□□ 1.49
TRAPPC9-215ENST00000524162 STAG2Q8N3U4 1231 aa24.33■■□□□ 1.49
TRAPPC9-215ENST00000524162 SOWAHBA6NEL2 793 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 SH2B2O14492 632 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 PRAMEF19Q5SWL8 479 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 ARMCX2Q7L311 632 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 CHST3Q7LGC8 479 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 SGMS1Q86VZ5 419 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 SAMD3Q8N6K7 520 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 NEK1Q96PY6 1258 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 C11orf49Q9H6J7 331 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 SENP2Q9HC62 589 aa24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.32■■□□□ 1.48
TRAPPC9-215ENST00000524162 NFIBO00712 420 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 ZBTB5O15062 677 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 CALM1P0DP23 149 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 CALM2P0DP24 149 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 CALM3P0DP25 149 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 RARBP10826 455 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 KIF5BP33176 963 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 HSPA4P34932 840 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 GHRHRQ02643 423 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 ACVR2BQ13705 512 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 QRICH1Q2TAL8 776 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 NSMFQ6X4W1 530 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 FBXO11Q86XK2 927 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 CCDC144CPQ8IYA2 1237 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 ZNF654Q8IZM8 581 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 DNERQ8NFT8 737 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 KATNBL1Q9H079 304 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 CPVLQ9H3G5 476 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 MAP3K20Q9NYL2 800 aaKnown RBP24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 FAM184BQ9ULE4 1060 aa24.31■■□□□ 1.48
TRAPPC9-215ENST00000524162 LRRC37A2A6NM11 1700 aa24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 EXOSC10Q01780 885 aaKnown RBP24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 BAATQ14032 418 aaPredicted RBP24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 RNF207Q6ZRF8 634 aa24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 DHX32Q7L7V1 743 aaKnown RBP24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 MCF2L2Q86YR7 1114 aa24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 DIS3LQ8TF46 1054 aaKnown RBP24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 LZTS2Q9BRK4 669 aa24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 AMNQ9BXJ7 453 aa24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 MRPL11Q9Y3B7 192 aaKnown RBP24.3■■□□□ 1.48
TRAPPC9-215ENST00000524162 TAL1P17542 331 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 GNAQP50148 359 aa24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 RASEFQ8IZ41 740 aa24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 CTCFLQ8NI51 663 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 SPZ1Q9BXG8 430 aa24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 NR2E3Q9Y5X4 410 aa24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 ASTN1O14525 1302 aa24.29■■□□□ 1.48
TRAPPC9-215ENST00000524162 CCDC69A6NI79 296 aa24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 DHX16O60231 1041 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 DUSP11O75319 330 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 RPS6P62753 249 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 NKX3-2P78367 333 aa24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 MPHOSPH6Q99547 160 aaKnown RBP24.28■■□□□ 1.48
TRAPPC9-215ENST00000524162 B4DLN1 442 aa24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 MRPL12P52815 198 aaKnown RBP24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 FBXL16Q8N461 479 aa24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 DPF3Q92784 378 aa24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 VTA1Q9NP79 307 aa24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 XPNPEP3Q9NQH7 507 aa24.27■■□□□ 1.48
TRAPPC9-215ENST00000524162 PNMA6FA0A0J9YX94 578 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 PTPDC1A2A3K4 754 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 KBTBD13C9JR72 458 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 CYTH3O43739 400 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 EDNRBP24530 442 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 ALDH5A1P51649 535 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 RCAN1P53805 252 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 USH1GQ495M9 461 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 RNF180Q86T96 592 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 TSEN34Q9BSV6 310 aaKnown RBP24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 VAT1LQ9HCJ6 419 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 SLC12A7Q9Y666 1083 aa24.26■■□□□ 1.47
TRAPPC9-215ENST00000524162 CST5P28325 142 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms