RNA–Protein interactions for RNA: ENST00000521477.5

DENND3-216, Transcript of DENN domain containing 3, human

TSL 3

Gene DENND3, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-216	ENST00000521477	TMTC3	Q6ZXV5	915 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	MICU3	Q86XE3	530 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	STAG2	Q8N3U4	1231 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	RRP36	Q96EU6	259 aa	Known RBP	13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	AGBL1	Q96MI9	1066 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	TMEM106C	Q9BVX2	250 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	LRRC2	Q9BYS8	371 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	UBA5	Q9GZZ9	404 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	SENP2	Q9HC62	589 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	BIN2	Q9UBW5	565 aa	Predicted RBP	13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	ADD3	Q9UEY8	706 aa	Known RBP	13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	RIPK3	Q9Y572	518 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	SYNGAP1	Q96PV0	1343 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	PLXNA1	Q9UIW2	1896 aa		13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.78	□□□□□ -0.2
DENND3-216	ENST00000521477	GOLGA8A	A7E2F4	631 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	GOLGA8B	A8MQT2	603 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	IGHA2	P01877	340 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	INHA	P05111	366 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	RBM25	P49756	843 aa	Known RBP	13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	METAP2	P50579	478 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	MAMDC4	Q6UXC1	1216 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	RPTOR	Q8N122	1335 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	FAM177A1	Q8N128	213 aa	Predicted RBP	13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	BRF1	Q92994	677 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	ZNF274	Q96GC6	653 aa	Predicted RBP	13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	MAML3	Q96JK9	1138 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	A1CF	Q9NQ94	594 aa	Known RBP	13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	PDRG1	Q9NUG6	133 aa		13.77	□□□□□ -0.21
DENND3-216	ENST00000521477	ASB14	A6NK59	587 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	POTEB2	H3BUK9	544 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	PPP1R18	Q6NYC8	613 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	CPLX2	Q6PUV4	134 aa	Known RBP	13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	DNER	Q8NFT8	737 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	TRIB2	Q92519	343 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	GLT8D2	Q9H1C3	349 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	HMX1	Q9NP08	348 aa	Predicted RBP	13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	GPHN	Q9NQX3	736 aa	Predicted RBP	13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	HOMER2	Q9NSB8	354 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	CYP39A1	Q9NYL5	469 aa		13.76	□□□□□ -0.21
DENND3-216	ENST00000521477	CYTH3	O43739	400 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	COBL	O75128	1261 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	GJB1	P08034	283 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	FAM133A	Q8N9E0	248 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	SH3TC2	Q8TF17	1288 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	TCEANC2	Q96MN5	208 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	TINF2	Q9BSI4	451 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	MYL10	Q9BUA6	226 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	C22orf23	Q9BZE7	217 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	PAK6	Q9NQU5	681 aa	Predicted RBP	13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	BRPF3	Q9ULD4	1205 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	PCDHA1	Q9Y5I3	950 aa		13.75	□□□□□ -0.21
DENND3-216	ENST00000521477	CDKL5	O76039	1030 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	ECM2	O94769	699 aa	Predicted RBP	13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	PRKAR2A	P13861	404 aa	Known RBP	13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	ELN	P15502	786 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	APOBR	Q0VD83	1088 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	NSMF	Q6X4W1	530 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	RNF207	Q6ZRF8	634 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	SRBD1	Q8N5C6	995 aa	Known RBP	13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	NPLOC4	Q8TAT6	608 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	CLEC4D	Q8WXI8	215 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	PIGS	Q96S52	555 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	VAT1L	Q9HCJ6	419 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	CNPY2	Q9Y2B0	182 aa		13.74	□□□□□ -0.21
DENND3-216	ENST00000521477	CNTNAP5	Q8WYK1	1306 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	PLEKHA8P1	O95397	391 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	SEC24B	O95487	1268 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	CCL5	P13501	91 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	PDIA3	P30101	505 aa	Known RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	SLC4A3	P48751	1232 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	COL9A3	Q14050	684 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	TOB2	Q14106	344 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	USH1G	Q495M9	461 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	MUM1L1	Q5H9M0	696 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	HOMER1	Q86YM7	354 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	ANKLE1	Q8NAG6	615 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	MORC4	Q8TE76	937 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	RNF26	Q9BY78	433 aa	Predicted RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	UPF3B	Q9BZI7	483 aa	Known RBP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	ABHD16B	Q9H3Z7	469 aa		13.73	□□□□□ -0.21
DENND3-216	ENST00000521477	PTPDC1	A2A3K4	754 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CCDC85C	A6NKD9	419 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	NFIB	O00712	420 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	PGK2	P07205	417 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CYBA	P13498	195 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CPA1	P15085	419 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	IFNAR1	P17181	557 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	GJA8	P48165	433 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	HSD17B4	P51659	736 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	SNAP25	P60880	206 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	RPS6	P62753	249 aa	Known RBP	13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	AKAP17A	Q02040	695 aa	Known RBP	13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CACNB2	Q08289	660 aa	Predicted RBP	13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	RABEP1	Q15276	862 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	MCTP2	Q6DN12	878 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	TRIM22	Q8IYM9	498 aa		13.72	□□□□□ -0.21
DENND3-216	ENST00000521477	CUL5	Q93034	780 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms