RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 SNX17Q15036 470 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 NSMFQ6X4W1 530 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 STOX1Q6ZVD7 989 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 RNF180Q86T96 592 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 KLHDC9Q8NEP7 349 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 UBAC1Q9BSL1 405 aa25.24■■□□□ 1.63
HOXA3-204ENST00000521401 SYNRGQ9UMZ2 1314 aa25.23■■□□□ 1.63
HOXA3-204ENST00000521401 DUSP11O75319 330 aaKnown RBP25.23■■□□□ 1.63
HOXA3-204ENST00000521401 RTP1P59025 263 aa25.23■■□□□ 1.63
HOXA3-204ENST00000521401 BAATQ14032 418 aaPredicted RBP25.23■■□□□ 1.63
HOXA3-204ENST00000521401 CCDC144BQ3MJ40 725 aa25.23■■□□□ 1.63
HOXA3-204ENST00000521401 FERMT2Q96AC1 680 aa25.23■■□□□ 1.63
HOXA3-204ENST00000521401 SMCHD1A6NHR9 2005 aa25.22■■□□□ 1.63
HOXA3-204ENST00000521401 ASB14A6NK59 587 aa25.22■■□□□ 1.63
HOXA3-204ENST00000521401 BMP8BP34820 402 aa25.22■■□□□ 1.63
HOXA3-204ENST00000521401 IRX5P78411 483 aaPredicted RBP25.22■■□□□ 1.63
HOXA3-204ENST00000521401 ASPRV1Q53RT3 343 aa25.22■■□□□ 1.63
HOXA3-204ENST00000521401 IFIT1BQ5T764 474 aaKnown RBP25.22■■□□□ 1.63
HOXA3-204ENST00000521401 CCSAPQ6IQ19 270 aaPredicted RBP25.22■■□□□ 1.63
HOXA3-204ENST00000521401 PNMA2Q9UL42 364 aa25.22■■□□□ 1.63
HOXA3-204ENST00000521401 MYADML2A6NDP7 307 aa25.21■■□□□ 1.63
HOXA3-204ENST00000521401 E7EWF7 191 aa25.21■■□□□ 1.63
HOXA3-204ENST00000521401 MAGEA10P43363 369 aaPredicted RBP25.21■■□□□ 1.63
HOXA3-204ENST00000521401 TRDNQ13061 729 aa25.21■■□□□ 1.63
HOXA3-204ENST00000521401 MORC4Q8TE76 937 aa25.21■■□□□ 1.63
HOXA3-204ENST00000521401 LSG1Q9H089 658 aaKnown RBP25.21■■□□□ 1.63
HOXA3-204ENST00000521401 RBM8AQ9Y5S9 174 aaKnown RBP25.21■■□□□ 1.63
HOXA3-204ENST00000521401 C1orf53Q5VUE5 145 aa25.2■■□□□ 1.62
HOXA3-204ENST00000521401 SLC30A10Q6XR72 485 aa25.2■■□□□ 1.62
HOXA3-204ENST00000521401 ADGRF4Q8IZF3 695 aa25.2■■□□□ 1.62
HOXA3-204ENST00000521401 ESYT1Q9BSJ8 1104 aa25.2■■□□□ 1.62
HOXA3-204ENST00000521401 TSEN34Q9BSV6 310 aaKnown RBP25.2■■□□□ 1.62
HOXA3-204ENST00000521401 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.19■■□□□ 1.62
HOXA3-204ENST00000521401 A0A1W2PPC1 479 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 PARP1P09874 1014 aaKnown RBP25.19■■□□□ 1.62
HOXA3-204ENST00000521401 CDC37Q16543 378 aaPredicted RBP25.19■■□□□ 1.62
HOXA3-204ENST00000521401 TRIM60Q495X7 471 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 BMP2KLQ5H9B9 411 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 STAG2Q8N3U4 1231 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 UPF3AQ9H1J1 476 aaKnown RBP25.19■■□□□ 1.62
HOXA3-204ENST00000521401 SENP2Q9HC62 589 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 ATP11BQ9Y2G3 1177 aa25.19■■□□□ 1.62
HOXA3-204ENST00000521401 A0A1W2PQ45 241 aaPredicted RBP25.18■■□□□ 1.62
HOXA3-204ENST00000521401 A0A1W2PQY0 241 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 CTAGE5O15320 804 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 CST5P28325 142 aaPredicted RBP25.18■■□□□ 1.62
HOXA3-204ENST00000521401 GJA9P57773 515 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 NKX3-2P78367 333 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 TAPT1Q6NXT6 567 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 NCOA7Q8NI08 942 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 JMJD4Q9H9V9 463 aa25.18■■□□□ 1.62
HOXA3-204ENST00000521401 DNAH12Q6ZR08 3092 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 PTPDC1A2A3K4 754 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 ALDH5A1P51649 535 aaPredicted RBP25.17■■□□□ 1.62
HOXA3-204ENST00000521401 ACLYP53396 1101 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 ANTXR2P58335 489 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 RPS6P62753 249 aaKnown RBP25.17■■□□□ 1.62
HOXA3-204ENST00000521401 KCNA10Q16322 511 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 USH1GQ495M9 461 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 RNF207Q6ZRF8 634 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 MB21D2Q8IYB1 491 aaPredicted RBP25.17■■□□□ 1.62
HOXA3-204ENST00000521401 PDGFCQ9NRA1 345 aa25.17■■□□□ 1.62
HOXA3-204ENST00000521401 GNEQ9Y223 722 aaKnown RBP25.17■■□□□ 1.62
HOXA3-204ENST00000521401 TRIOBPQ9H2D6 2365 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 MOXD2PA6NHM9 499 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 IFIT3O14879 490 aaKnown RBP25.16■■□□□ 1.62
HOXA3-204ENST00000521401 CALML3P27482 149 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 TNFAIP2Q03169 654 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 QRICH1Q2TAL8 776 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 CHST3Q7LGC8 479 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 RALYLQ86SE5 291 aaKnown RBP25.16■■□□□ 1.62
HOXA3-204ENST00000521401 FBXO16Q8IX29 292 aaPredicted RBP25.16■■□□□ 1.62
HOXA3-204ENST00000521401 RGS22Q8NE09 1264 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 ADD3Q9UEY8 706 aaKnown RBP25.16■■□□□ 1.62
HOXA3-204ENST00000521401 MAD2L2Q9UI95 211 aa25.16■■□□□ 1.62
HOXA3-204ENST00000521401 PALM3A6NDB9 673 aaPredicted RBP25.15■■□□□ 1.62
HOXA3-204ENST00000521401 C6orf222P0C671 652 aaPredicted RBP25.15■■□□□ 1.62
HOXA3-204ENST00000521401 PTGS1P23219 599 aa25.15■■□□□ 1.62
HOXA3-204ENST00000521401 SLC35G1Q2M3R5 365 aa25.15■■□□□ 1.62
HOXA3-204ENST00000521401 TMEM63BQ5T3F8 832 aa25.15■■□□□ 1.62
HOXA3-204ENST00000521401 EEPD1Q7L9B9 569 aa25.15■■□□□ 1.62
HOXA3-204ENST00000521401 VAT1LQ9HCJ6 419 aa25.15■■□□□ 1.62
HOXA3-204ENST00000521401 LCTP09848 1927 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 LOC102724159A0A0B4J2E5 919 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 SMPD1P17405 629 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 MDM2Q00987 491 aaPredicted RBP25.14■■□□□ 1.62
HOXA3-204ENST00000521401 TLE2Q04725 743 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 PWP2Q15269 919 aaKnown RBP25.14■■□□□ 1.62
HOXA3-204ENST00000521401 KIAA1211Q6ZU35 1233 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 IGDCC4Q8TDY8 1250 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 TBC1D5Q92609 795 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 MTMR8Q96EF0 704 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 VTA1Q9NP79 307 aa25.14■■□□□ 1.62
HOXA3-204ENST00000521401 MCM3APO60318 1980 aa25.14■■□□□ 1.61
HOXA3-204ENST00000521401 KLRF2D3W0D1 207 aa25.13■■□□□ 1.61
HOXA3-204ENST00000521401 EDNRBP24530 442 aa25.13■■□□□ 1.61
HOXA3-204ENST00000521401 TROAPQ12815 778 aa25.13■■□□□ 1.61
HOXA3-204ENST00000521401 COL9A3Q14050 684 aaPredicted RBP25.13■■□□□ 1.61
HOXA3-204ENST00000521401 GRM4Q14833 912 aa25.13■■□□□ 1.61
HOXA3-204ENST00000521401 WTAPQ15007 396 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms