RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ADGRF4Q8IZF3 695 aa28.76■■■□□ 2.19
PVT1-204ENST00000517525 IGDCC4Q8TDY8 1250 aa28.76■■■□□ 2.19
PVT1-204ENST00000517525 PCDH10Q9P2E7 1040 aa28.76■■■□□ 2.19
PVT1-204ENST00000517525 NFIBO00712 420 aa28.75■■■□□ 2.19
PVT1-204ENST00000517525 SLC27A2O14975 620 aa28.75■■■□□ 2.19
PVT1-204ENST00000517525 NSMFQ6X4W1 530 aa28.75■■■□□ 2.19
PVT1-204ENST00000517525 ANO2Q9NQ90 1003 aa28.75■■■□□ 2.19
PVT1-204ENST00000517525 XPNPEP3Q9NQH7 507 aa28.75■■■□□ 2.19
PVT1-204ENST00000517525 ASTN1O14525 1302 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 SMCHD1A6NHR9 2005 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 TROAPQ12815 778 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 BAATQ14032 418 aaPredicted RBP28.74■■■□□ 2.19
PVT1-204ENST00000517525 WTAPQ15007 396 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 CDC37Q16543 378 aaPredicted RBP28.74■■■□□ 2.19
PVT1-204ENST00000517525 ANO1Q5XXA6 986 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 CREB3L3Q68CJ9 461 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 MTMR8Q96EF0 704 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 CPVLQ9H3G5 476 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 JMJD4Q9H9V9 463 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 ADD3Q9UEY8 706 aaKnown RBP28.74■■■□□ 2.19
PVT1-204ENST00000517525 MAD2L2Q9UI95 211 aa28.74■■■□□ 2.19
PVT1-204ENST00000517525 KBTBD13C9JR72 458 aa28.73■■■□□ 2.19
PVT1-204ENST00000517525 DUSP11O75319 330 aaKnown RBP28.73■■■□□ 2.19
PVT1-204ENST00000517525 GRM4Q14833 912 aa28.73■■■□□ 2.19
PVT1-204ENST00000517525 GJC2Q5T442 439 aaPredicted RBP28.73■■■□□ 2.19
PVT1-204ENST00000517525 MAP3K14Q99558 947 aa28.73■■■□□ 2.19
PVT1-204ENST00000517525 SENP6Q9GZR1 1112 aaPredicted RBP28.73■■■□□ 2.19
PVT1-204ENST00000517525 ZHX1Q9UKY1 873 aaPredicted RBP28.73■■■□□ 2.19
PVT1-204ENST00000517525 KLRF2D3W0D1 207 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 ADAMTS4O75173 837 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 NKX3-2P78367 333 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 LRRC26Q2I0M4 334 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 RNF180Q86T96 592 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 STAG2Q8N3U4 1231 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 TSEN34Q9BSV6 310 aaKnown RBP28.72■■■□□ 2.19
PVT1-204ENST00000517525 PHF24Q9UPV7 400 aa28.72■■■□□ 2.19
PVT1-204ENST00000517525 ABCB11O95342 1321 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 ALPK3Q96L96 1907 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 MCM5P33992 734 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 CCDC144BQ3MJ40 725 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 TSGA10IPQ3SY00 556 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 TMEM67Q5HYA8 995 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 C1orf53Q5VUE5 145 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 TMTC2Q8N394 836 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 KLHDC9Q8NEP7 349 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 PRO3102Q9H379 93 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 SENP2Q9HC62 589 aa28.71■■■□□ 2.19
PVT1-204ENST00000517525 SNX17Q15036 470 aa28.7■■■□□ 2.18
PVT1-204ENST00000517525 QRICH1Q2TAL8 776 aa28.7■■■□□ 2.18
PVT1-204ENST00000517525 RNF20Q5VTR2 975 aa28.7■■■□□ 2.18
PVT1-204ENST00000517525 RNF207Q6ZRF8 634 aa28.7■■■□□ 2.18
PVT1-204ENST00000517525 TMEM87BQ96K49 555 aa28.7■■■□□ 2.18
PVT1-204ENST00000517525 UPF3AQ9H1J1 476 aaKnown RBP28.7■■■□□ 2.18
PVT1-204ENST00000517525 CST5P28325 142 aaPredicted RBP28.69■■■□□ 2.18
PVT1-204ENST00000517525 RPS6P62753 249 aaKnown RBP28.69■■■□□ 2.18
PVT1-204ENST00000517525 CHST3Q7LGC8 479 aa28.69■■■□□ 2.18
PVT1-204ENST00000517525 CATIPQ7Z7H3 387 aa28.69■■■□□ 2.18
PVT1-204ENST00000517525 DNERQ8NFT8 737 aa28.69■■■□□ 2.18
PVT1-204ENST00000517525 RIOX1Q9H6W3 641 aa28.69■■■□□ 2.18
PVT1-204ENST00000517525 LY9Q9HBG7 655 aa28.69■■■□□ 2.18
PVT1-204ENST00000517525 PGK1P00558 417 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 LIFRP42702 1097 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 CCSAPQ6IQ19 270 aaPredicted RBP28.68■■■□□ 2.18
PVT1-204ENST00000517525 FBXO11Q86XK2 927 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 C7orf61Q8IZ16 206 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 VTA1Q9NP79 307 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 COLQQ9Y215 455 aaPredicted RBP28.68■■■□□ 2.18
PVT1-204ENST00000517525 SYNRGQ9UMZ2 1314 aa28.68■■■□□ 2.18
PVT1-204ENST00000517525 PTPDC1A2A3K4 754 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 PRC1O43663 620 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 ALDH5A1P51649 535 aaPredicted RBP28.67■■■□□ 2.18
PVT1-204ENST00000517525 GJA9P57773 515 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 GHRHRQ02643 423 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 HABP4Q5JVS0 413 aaKnown RBP28.67■■■□□ 2.18
PVT1-204ENST00000517525 IQSEC1Q6DN90 963 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 SLC30A10Q6XR72 485 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 SLC39A5Q6ZMH5 540 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 MCF2L2Q86YR7 1114 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 AMNQ9BXJ7 453 aa28.67■■■□□ 2.18
PVT1-204ENST00000517525 MRPL11Q9Y3B7 192 aaKnown RBP28.67■■■□□ 2.18
PVT1-204ENST00000517525 ZBTB5O15062 677 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 ADCY6O43306 1168 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 DDAH1O94760 285 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 EDNRBP24530 442 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 ADCYAP1R1P41586 468 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 TRAF1Q13077 416 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 SLC35G1Q2M3R5 365 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 USH1GQ495M9 461 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 TAPT1Q6NXT6 567 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 LENG1Q96BZ8 264 aaPredicted RBP28.66■■■□□ 2.18
PVT1-204ENST00000517525 PURBQ96QR8 312 aaKnown RBP28.66■■■□□ 2.18
PVT1-204ENST00000517525 VAT1LQ9HCJ6 419 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 PPP4R2Q9NY27 417 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 Q9Y3F1 56 aa28.66■■■□□ 2.18
PVT1-204ENST00000517525 MCM3APO60318 1980 aa28.65■■■□□ 2.18
PVT1-204ENST00000517525 MOXD2PA6NHM9 499 aa28.65■■■□□ 2.18
PVT1-204ENST00000517525 SH2B2O14492 632 aaPredicted RBP28.65■■■□□ 2.18
PVT1-204ENST00000517525 DHX16O60231 1041 aaKnown RBP28.65■■■□□ 2.18
PVT1-204ENST00000517525 SMARCA1P28370 1054 aa28.65■■■□□ 2.18
PVT1-204ENST00000517525 SAMD3Q8N6K7 520 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms