RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 NFIBO00712 420 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 PRC1O43663 620 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ANTXR2P58335 489 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TRAF1Q13077 416 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 BAATQ14032 418 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 GRM4Q14833 912 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 TSGA10IPQ3SY00 556 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ARMCX2Q7L311 632 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 STAG2Q8N3U4 1231 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CLEC4DQ8WXI8 215 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 FGD4Q96M96 766 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MAP3K14Q99558 947 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 JMJD4Q9H9V9 463 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ZHX1Q9UKY1 873 aaPredicted RBP13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 PLXNA1Q9UIW2 1896 aa13.05□□□□□ -0.32
SCARNA16.1-201ENST00000516133 PTPDC1A2A3K4 754 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 B4DLN1 442 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 KBTBD13C9JR72 458 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 H0YGN5 161 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 REC8O95072 547 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 KIF5BP33176 963 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 LIFRP42702 1097 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 KRT32Q14532 448 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 USH1GQ495M9 461 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RNF180Q86T96 592 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MCF2L2Q86YR7 1114 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MPHOSPH6Q99547 160 aaKnown RBP13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 AMNQ9BXJ7 453 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SENP6Q9GZR1 1112 aaPredicted RBP13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 LY9Q9HBG7 655 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MRPL11Q9Y3B7 192 aaKnown RBP13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ABCB11O95342 1321 aa13.04□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 ZBTB5O15062 677 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DUSP11O75319 330 aaKnown RBP13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DDAH1O94760 285 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 LRRC41Q15345 812 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 NFXL1Q6ZNB6 911 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 CTCFLQ8NI51 663 aaPredicted RBP13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 MTMR8Q96EF0 704 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 NEK1Q96PY6 1258 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 RIOX1Q9H6W3 641 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
SCARNA16.1-201ENST00000516133 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 CALM1P0DP23 149 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 CALM2P0DP24 149 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 CALM3P0DP25 149 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 CALML3P27482 149 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 GNAQP50148 359 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 DHX32Q7L7V1 743 aaKnown RBP13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 MORC4Q8TE76 937 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 TSEN34Q9BSV6 310 aaKnown RBP13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 KATNBL1Q9H079 304 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.33
SCARNA16.1-201ENST00000516133 PNMA6FA0A0J9YX94 578 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 PGK1P00558 417 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 TNFAIP2Q03169 654 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 SLC30A10Q6XR72 485 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 SYNE3Q6ZMZ3 975 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 SAMD3Q8N6K7 520 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 PURBQ96QR8 312 aaKnown RBP13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
SCARNA16.1-201ENST00000516133 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms