RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
ITGA3-214ENST00000514834 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
ITGA3-214ENST00000514834 PTGS1P23219 599 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 ADCYAP1R1P41586 468 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 BAATQ14032 418 aaPredicted RBP16.26■□□□□ 0.19
ITGA3-214ENST00000514834 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
ITGA3-214ENST00000514834 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 FERMT2Q96AC1 680 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 XPNPEP3Q9NQH7 507 aa16.26■□□□□ 0.19
ITGA3-214ENST00000514834 RARBP10826 455 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 ANTXR2P58335 489 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 CCDC144BQ3MJ40 725 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 CCDC178Q5BJE1 867 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 TMEM63BQ5T3F8 832 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
ITGA3-214ENST00000514834 GPHNQ9NQX3 736 aaPredicted RBP16.25■□□□□ 0.19
ITGA3-214ENST00000514834 MYADML2A6NDP7 307 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 ADAMTS4O75173 837 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 AKR1A1P14550 325 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 NT5C2P49902 561 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 SLC35G1Q2M3R5 365 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 GPATCH4Q5T3I0 446 aaKnown RBP16.24■□□□□ 0.19
ITGA3-214ENST00000514834 IFIT1BQ5T764 474 aaKnown RBP16.24■□□□□ 0.19
ITGA3-214ENST00000514834 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 TBC1D5Q92609 795 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 FAM184BQ9ULE4 1060 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 LRRC37A2A6NM11 1700 aa16.24■□□□□ 0.19
ITGA3-214ENST00000514834 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.23■□□□□ 0.19
ITGA3-214ENST00000514834 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 USH1GQ495M9 461 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 SLC39A5Q6ZMH5 540 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 ABHD16BQ9H3Z7 469 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 JMJD4Q9H9V9 463 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
ITGA3-214ENST00000514834 MYH6P13533 1939 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 BAZ2BQ9UIF8 2168 aaKnown RBP16.22■□□□□ 0.19
ITGA3-214ENST00000514834 IFIT3O14879 490 aaKnown RBP16.22■□□□□ 0.19
ITGA3-214ENST00000514834 PARP1P09874 1014 aaKnown RBP16.22■□□□□ 0.19
ITGA3-214ENST00000514834 RTP1P59025 263 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 TRDNQ13061 729 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 CDC37Q16543 378 aaPredicted RBP16.22■□□□□ 0.19
ITGA3-214ENST00000514834 ASPRV1Q53RT3 343 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
ITGA3-214ENST00000514834 IGDCC4Q8TDY8 1250 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 GDF15Q99988 308 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 MAD2L2Q9UI95 211 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 PHF24Q9UPV7 400 aa16.22■□□□□ 0.19
ITGA3-214ENST00000514834 WDR19Q8NEZ3 1342 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 SLC27A2O14975 620 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 CTAGE5O15320 804 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.19
ITGA3-214ENST00000514834 CALML3P27482 149 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 MAGEA10P43363 369 aaPredicted RBP16.21■□□□□ 0.19
ITGA3-214ENST00000514834 FXR1P51114 621 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGA3-214ENST00000514834 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
ITGA3-214ENST00000514834 TAPT1Q6NXT6 567 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 FBXO16Q8IX29 292 aaPredicted RBP16.21■□□□□ 0.19
ITGA3-214ENST00000514834 KLHDC9Q8NEP7 349 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 ATP11BQ9Y2G3 1177 aa16.21■□□□□ 0.19
ITGA3-214ENST00000514834 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
ITGA3-214ENST00000514834 ASB14A6NK59 587 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 KLRF2D3W0D1 207 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 PPP1R11O60927 126 aaPredicted RBP16.2■□□□□ 0.18
ITGA3-214ENST00000514834 ALDH5A1P51649 535 aaPredicted RBP16.2■□□□□ 0.18
ITGA3-214ENST00000514834 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
ITGA3-214ENST00000514834 NECTIN1Q15223 517 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 KCNA10Q16322 511 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 TRIM60Q495X7 471 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 RNF207Q6ZRF8 634 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 RALYLQ86SE5 291 aaKnown RBP16.2■□□□□ 0.18
ITGA3-214ENST00000514834 RNF180Q86T96 592 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 MORC4Q8TE76 937 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
ITGA3-214ENST00000514834 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 A0A1W2PQ45 241 aaPredicted RBP16.19■□□□□ 0.18
ITGA3-214ENST00000514834 A0A1W2PQY0 241 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
ITGA3-214ENST00000514834 SMPD1P17405 629 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 ACLYP53396 1101 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 TROAPQ12815 778 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 GRM4Q14833 912 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 WTAPQ15007 396 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 SNX17Q15036 470 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 UPF3AQ9H1J1 476 aaKnown RBP16.19■□□□□ 0.18
ITGA3-214ENST00000514834 COL20A1Q9P218 1284 aa16.19■□□□□ 0.18
ITGA3-214ENST00000514834 OPLAHO14841 1288 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms