RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 PARP1P09874 1014 aaKnown RBP19.28■□□□□ 0.68
DDX41-213ENST00000512027 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
DDX41-213ENST00000512027 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 SLC30A10Q6XR72 485 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
DDX41-213ENST00000512027 VAT1LQ9HCJ6 419 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 XPNPEP3Q9NQH7 507 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 NRBP1Q9UHY1 535 aa19.28■□□□□ 0.68
DDX41-213ENST00000512027 DNM1LO00429 736 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 DHX16O60231 1041 aaKnown RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 RARBP10826 455 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 AKR1A1P14550 325 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 ATN1P54259 1190 aaPredicted RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 IRX5P78411 483 aaPredicted RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 ACVR2BQ13705 512 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 LRRC41Q15345 812 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 CREB3L3Q68CJ9 461 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 MSL3Q8N5Y2 521 aaKnown RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 CLEC4DQ8WXI8 215 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 KATNBL1Q9H079 304 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 ZMYND8Q9ULU4 1186 aaPredicted RBP19.27■□□□□ 0.68
DDX41-213ENST00000512027 NR2E3Q9Y5X4 410 aa19.27■□□□□ 0.68
DDX41-213ENST00000512027 BAZ2BQ9UIF8 2168 aaKnown RBP19.26■□□□□ 0.67
DDX41-213ENST00000512027 RANBP2P49792 3224 aaKnown RBP19.26■□□□□ 0.67
DDX41-213ENST00000512027 PTPDC1A2A3K4 754 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 CDC45O75419 566 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 WTAPQ15007 396 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 TMEM67Q5HYA8 995 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 CHRDL2Q6WN34 429 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 JMJD4Q9H9V9 463 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 MAD2L2Q9UI95 211 aa19.26■□□□□ 0.67
DDX41-213ENST00000512027 COLQQ9Y215 455 aaPredicted RBP19.26■□□□□ 0.67
DDX41-213ENST00000512027 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 KBTBD13C9JR72 458 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 SYN1P17600 705 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 PTGS1P23219 599 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 CALML3P27482 149 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 SLC35G1Q2M3R5 365 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 QRICH1Q2TAL8 776 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 EEPD1Q7L9B9 569 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 FAM184BQ9ULE4 1060 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
DDX41-213ENST00000512027 TRIOBPQ9H2D6 2365 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.24■□□□□ 0.67
DDX41-213ENST00000512027 ERICH2A1L162 156 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 KLRF2D3W0D1 207 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 PRC1O43663 620 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 CCDC144BQ3MJ40 725 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 FBXO16Q8IX29 292 aaPredicted RBP19.24■□□□□ 0.67
DDX41-213ENST00000512027 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 TBC1D5Q92609 795 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 MYL10Q9BUA6 226 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 ABHD16BQ9H3Z7 469 aa19.24■□□□□ 0.67
DDX41-213ENST00000512027 ADAMTS4O75173 837 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 GRM4Q14833 912 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 SART3Q15020 963 aaKnown RBP19.23■□□□□ 0.67
DDX41-213ENST00000512027 TMEM63BQ5T3F8 832 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 RNF207Q6ZRF8 634 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 LY9Q9HBG7 655 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 PDGFCQ9NRA1 345 aa19.23■□□□□ 0.67
DDX41-213ENST00000512027 PALM3A6NDB9 673 aaPredicted RBP19.22■□□□□ 0.67
DDX41-213ENST00000512027 ASB14A6NK59 587 aa19.22■□□□□ 0.67
DDX41-213ENST00000512027 PPP1R11O60927 126 aaPredicted RBP19.22■□□□□ 0.67
DDX41-213ENST00000512027 ALDH5A1P51649 535 aaPredicted RBP19.22■□□□□ 0.67
DDX41-213ENST00000512027 RPS6P62753 249 aaKnown RBP19.22■□□□□ 0.67
DDX41-213ENST00000512027 TROAPQ12815 778 aa19.22■□□□□ 0.67
DDX41-213ENST00000512027 HABP4Q5JVS0 413 aaKnown RBP19.22■□□□□ 0.67
DDX41-213ENST00000512027 RTP1P59025 263 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 CASC1Q6TDU7 716 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 FBXO11Q86XK2 927 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 HOMER1Q86YM7 354 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 RAB11FIP4Q86YS3 637 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 ABCB11O95342 1321 aa19.21■□□□□ 0.67
DDX41-213ENST00000512027 SH2B2O14492 632 aaPredicted RBP19.2■□□□□ 0.66
DDX41-213ENST00000512027 DUSP11O75319 330 aaKnown RBP19.2■□□□□ 0.66
DDX41-213ENST00000512027 RXRAP19793 462 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 MCM5P33992 734 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 SLC39A5Q6ZMH5 540 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 RNF180Q86T96 592 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 RASEFQ8IZ41 740 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 PIGSQ96S52 555 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
DDX41-213ENST00000512027 PHF24Q9UPV7 400 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 ATP11BQ9Y2G3 1177 aa19.2■□□□□ 0.66
DDX41-213ENST00000512027 LTBP2Q14767 1821 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 A0A1W2PQ45 241 aaPredicted RBP19.19■□□□□ 0.66
DDX41-213ENST00000512027 A0A1W2PQY0 241 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 CYTH3O43739 400 aa19.19■□□□□ 0.66
DDX41-213ENST00000512027 C6orf222P0C671 652 aaPredicted RBP19.19■□□□□ 0.66
DDX41-213ENST00000512027 ADCK5Q3MIX3 580 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms