RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 ADGRF4Q8IZF3 695 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 NUP133Q8WUM0 1156 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 ANKS1AQ92625 1134 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.65
DDX41-209ENST00000508279 SENP2Q9HC62 589 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.96□□□□□ -0.65
DDX41-209ENST00000508279 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.65
DDX41-209ENST00000508279 SYNGAP1Q96PV0 1343 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 SNAI1O95863 264 aaPredicted RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 PGK1P00558 417 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 AKR1A1P14550 325 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 ACVR2BQ13705 512 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 BAATQ14032 418 aaPredicted RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 EEPD1Q7L9B9 569 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 MB21D2Q8IYB1 491 aaPredicted RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 ARRDC4Q8NCT1 418 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 FERMT2Q96AC1 680 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 FGD4Q96M96 766 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 XPNPEP3Q9NQH7 507 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
DDX41-209ENST00000508279 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
DDX41-209ENST00000508279 ASB14A6NK59 587 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 KLRF2D3W0D1 207 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 PRC1O43663 620 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 SYN1P17600 705 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 ANTXR2P58335 489 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 RNF20Q5VTR2 975 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 MAMDC4Q6UXC1 1216 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 SLC30A10Q6XR72 485 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 RNF207Q6ZRF8 634 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
DDX41-209ENST00000508279 CATIPQ7Z7H3 387 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 ZNF467Q7Z7K2 595 aaPredicted RBP10.94□□□□□ -0.66
DDX41-209ENST00000508279 HOMER1Q86YM7 354 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 MSL3Q8N5Y2 521 aaKnown RBP10.94□□□□□ -0.66
DDX41-209ENST00000508279 FAM133AQ8N9E0 248 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 MYL10Q9BUA6 226 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 LRRC2Q9BYS8 371 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 ABHD16BQ9H3Z7 469 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 GPHNQ9NQX3 736 aaPredicted RBP10.94□□□□□ -0.66
DDX41-209ENST00000508279 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 PCDH10Q9P2E7 1040 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 NRBP1Q9UHY1 535 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 FAM184BQ9ULE4 1060 aa10.94□□□□□ -0.66
DDX41-209ENST00000508279 DNM1LO00429 736 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 MCM5P33992 734 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 ADCYAP1R1P41586 468 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 GRM4Q14833 912 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 NECTIN1Q15223 517 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 LRRC41Q15345 812 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 LRRC26Q2I0M4 334 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 CCDC144BQ3MJ40 725 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 RNF180Q86T96 592 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 FBXO11Q86XK2 927 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 RAB11FIP4Q86YS3 637 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 FBXO16Q8IX29 292 aaPredicted RBP10.93□□□□□ -0.66
DDX41-209ENST00000508279 CLEC4DQ8WXI8 215 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
DDX41-209ENST00000508279 LRRC37A2A6NM11 1700 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 ASTN1O14525 1302 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 ABCB11O95342 1321 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 WDR19Q8NEZ3 1342 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 CCDC69A6NI79 296 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 C6orf222P0C671 652 aaPredicted RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 COL6A1P12109 1028 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 RXRAP19793 462 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 ALDH5A1P51649 535 aaPredicted RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 RPS6P62753 249 aaKnown RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 COL9A3Q14050 684 aaPredicted RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 IGDCC4Q8TDY8 1250 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 TBC1D5Q92609 795 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 VTI1AQ96AJ9 217 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 TCEANC2Q96MN5 208 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 LY9Q9HBG7 655 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 ADD3Q9UEY8 706 aaKnown RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 COLQQ9Y215 455 aaPredicted RBP10.92□□□□□ -0.66
DDX41-209ENST00000508279 ATP11BQ9Y2G3 1177 aa10.92□□□□□ -0.66
DDX41-209ENST00000508279 SYNRGQ9UMZ2 1314 aa10.91□□□□□ -0.66
DDX41-209ENST00000508279 PALM3A6NDB9 673 aaPredicted RBP10.91□□□□□ -0.66
DDX41-209ENST00000508279 ADCY6O43306 1168 aa10.91□□□□□ -0.66
DDX41-209ENST00000508279 CFBP00751 764 aa10.91□□□□□ -0.66
DDX41-209ENST00000508279 IRX5P78411 483 aaPredicted RBP10.91□□□□□ -0.66
DDX41-209ENST00000508279 TNFAIP2Q03169 654 aa10.91□□□□□ -0.66
DDX41-209ENST00000508279 CTCFLQ8NI51 663 aaPredicted RBP10.91□□□□□ -0.66
DDX41-209ENST00000508279 TMEM87BQ96K49 555 aa10.91□□□□□ -0.66
DDX41-209ENST00000508279 NEK1Q96PY6 1258 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms