RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SYNGAP1Q96PV0 1343 aa16.66■□□□□ 0.26
HOXC9-202ENST00000504557 LRRC37A2A6NM11 1700 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 SOWAHBA6NEL2 793 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 DNM1LO00429 736 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 NT5C2P49902 561 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 ACVR2BQ13705 512 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 BAATQ14032 418 aaPredicted RBP16.65■□□□□ 0.26
HOXC9-202ENST00000504557 WTAPQ15007 396 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 LRRC41Q15345 812 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 SEC23AQ15436 765 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
HOXC9-202ENST00000504557 ASPRV1Q53RT3 343 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 TMEM67Q5HYA8 995 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
HOXC9-202ENST00000504557 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 STAG2Q8N3U4 1231 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 FAM133AQ8N9E0 248 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 ANKS1AQ92625 1134 aa16.65■□□□□ 0.26
HOXC9-202ENST00000504557 COL6A1P12109 1028 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 ADCYAP1R1P41586 468 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 SART3Q15020 963 aaKnown RBP16.64■□□□□ 0.25
HOXC9-202ENST00000504557 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 MAMDC4Q6UXC1 1216 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXC9-202ENST00000504557 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
HOXC9-202ENST00000504557 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
HOXC9-202ENST00000504557 NRBP1Q9UHY1 535 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 FAM184BQ9ULE4 1060 aa16.64■□□□□ 0.25
HOXC9-202ENST00000504557 SLC27A2O14975 620 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 CDC45O75419 566 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 CCDC144BQ3MJ40 725 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 ABHD16BQ9H3Z7 469 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 ASTN1O14525 1302 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 TRIOBPQ9H2D6 2365 aa16.63■□□□□ 0.25
HOXC9-202ENST00000504557 ASB14A6NK59 587 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 KLRF2D3W0D1 207 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 ANTXR2P58335 489 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-202ENST00000504557 QRICH1Q2TAL8 776 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
HOXC9-202ENST00000504557 CREB3L3Q68CJ9 461 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 RNF180Q86T96 592 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 FBXO16Q8IX29 292 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-202ENST00000504557 NUP133Q8WUM0 1156 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 CLEC4DQ8WXI8 215 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
HOXC9-202ENST00000504557 SYNRGQ9UMZ2 1314 aa16.62■□□□□ 0.25
HOXC9-202ENST00000504557 ADCY6O43306 1168 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 PRC1O43663 620 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 C6orf222P0C671 652 aaPredicted RBP16.61■□□□□ 0.25
HOXC9-202ENST00000504557 PTGS1P23219 599 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 RTP1P59025 263 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 NFXL1Q6ZNB6 911 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
HOXC9-202ENST00000504557 MYL10Q9BUA6 226 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 JMJD4Q9H9V9 463 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 MAD2L2Q9UI95 211 aa16.61■□□□□ 0.25
HOXC9-202ENST00000504557 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.6■□□□□ 0.25
HOXC9-202ENST00000504557 MYADML2A6NDP7 307 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
HOXC9-202ENST00000504557 RPS6P62753 249 aaKnown RBP16.6■□□□□ 0.25
HOXC9-202ENST00000504557 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
HOXC9-202ENST00000504557 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 RAB11FIP4Q86YS3 637 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 RBM27Q9P2N5 1060 aaKnown RBP16.6■□□□□ 0.25
HOXC9-202ENST00000504557 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
HOXC9-202ENST00000504557 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 GRM4Q14833 912 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 TRIM60Q495X7 471 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 SLC39A5Q6ZMH5 540 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 VTI1AQ96AJ9 217 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
HOXC9-202ENST00000504557 ADD3Q9UEY8 706 aaKnown RBP16.59■□□□□ 0.25
HOXC9-202ENST00000504557 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 ABCB11O95342 1321 aa16.59■□□□□ 0.25
HOXC9-202ENST00000504557 ADAMTS4O75173 837 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 DUSP11O75319 330 aaKnown RBP16.58■□□□□ 0.24
HOXC9-202ENST00000504557 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.24
HOXC9-202ENST00000504557 RXRAP19793 462 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 MCM5P33992 734 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 BEX3Q00994 111 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 KCNA10Q16322 511 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 IGDCC4Q8TDY8 1250 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 KATNBL1Q9H079 304 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 MYH7BA7E2Y1 1941 aa16.58■□□□□ 0.24
HOXC9-202ENST00000504557 KIAA1217Q5T5P2 1943 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms