RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 RARBP10826 455 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 ACVR2BQ13705 512 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
PDAP1-204ENST00000496335 USH1GQ495M9 461 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 MB21D2Q8IYB1 491 aaPredicted RBP16.92■□□□□ 0.3
PDAP1-204ENST00000496335 STAG2Q8N3U4 1231 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 CLEC4DQ8WXI8 215 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 VAT1LQ9HCJ6 419 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 XPNPEP3Q9NQH7 507 aa16.92■□□□□ 0.3
PDAP1-204ENST00000496335 ERICH2A1L162 156 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 DHX16O60231 1041 aaKnown RBP16.91■□□□□ 0.3
PDAP1-204ENST00000496335 CDC45O75419 566 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 PGK1P00558 417 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 AKR1A1P14550 325 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 BAATQ14032 418 aaPredicted RBP16.91■□□□□ 0.3
PDAP1-204ENST00000496335 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 LRRC41Q15345 812 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 CDC37Q16543 378 aaPredicted RBP16.91■□□□□ 0.3
PDAP1-204ENST00000496335 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 CREB3L3Q68CJ9 461 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 GPHNQ9NQX3 736 aaPredicted RBP16.91■□□□□ 0.3
PDAP1-204ENST00000496335 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
PDAP1-204ENST00000496335 WDR19Q8NEZ3 1342 aa16.91■□□□□ 0.3
PDAP1-204ENST00000496335 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 KBTBD13C9JR72 458 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 ATN1P54259 1190 aaPredicted RBP16.9■□□□□ 0.3
PDAP1-204ENST00000496335 WTAPQ15007 396 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 CCDC144BQ3MJ40 725 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 TMEM67Q5HYA8 995 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 IGDCC4Q8TDY8 1250 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 KATNBL1Q9H079 304 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 ABHD16BQ9H3Z7 469 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 JMJD4Q9H9V9 463 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
PDAP1-204ENST00000496335 ASB14A6NK59 587 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 ADCY6O43306 1168 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 CALML3P27482 149 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 ADCYAP1R1P41586 468 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
PDAP1-204ENST00000496335 CHRDL2Q6WN34 429 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 FERMT2Q96AC1 680 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 PCDH10Q9P2E7 1040 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 PNMA2Q9UL42 364 aa16.89■□□□□ 0.29
PDAP1-204ENST00000496335 ZMYND8Q9ULU4 1186 aaPredicted RBP16.89■□□□□ 0.29
PDAP1-204ENST00000496335 RANBP2P49792 3224 aaKnown RBP16.88■□□□□ 0.29
PDAP1-204ENST00000496335 PALM3A6NDB9 673 aaPredicted RBP16.88■□□□□ 0.29
PDAP1-204ENST00000496335 PRC1O43663 620 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 SYN1P17600 705 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
PDAP1-204ENST00000496335 GRM4Q14833 912 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 SYNRGQ9UMZ2 1314 aa16.88■□□□□ 0.29
PDAP1-204ENST00000496335 LRRC37A2A6NM11 1700 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 ADAMTS4O75173 837 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
PDAP1-204ENST00000496335 TROAPQ12815 778 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 HABP4Q5JVS0 413 aaKnown RBP16.87■□□□□ 0.29
PDAP1-204ENST00000496335 RNF180Q86T96 592 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 LY9Q9HBG7 655 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 PDGFCQ9NRA1 345 aa16.87■□□□□ 0.29
PDAP1-204ENST00000496335 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-204ENST00000496335 MYADML2A6NDP7 307 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 DUSP11O75319 330 aaKnown RBP16.86■□□□□ 0.29
PDAP1-204ENST00000496335 PTGS1P23219 599 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 MCM5P33992 734 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-204ENST00000496335 SLC39A5Q6ZMH5 540 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
PDAP1-204ENST00000496335 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 PHF24Q9UPV7 400 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 ABCB11O95342 1321 aa16.86■□□□□ 0.29
PDAP1-204ENST00000496335 SH2B2O14492 632 aaPredicted RBP16.85■□□□□ 0.29
PDAP1-204ENST00000496335 PPP1R11O60927 126 aaPredicted RBP16.85■□□□□ 0.29
PDAP1-204ENST00000496335 RTP1P59025 263 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 TMEM63BQ5T3F8 832 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 TAPT1Q6NXT6 567 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 RASEFQ8IZ41 740 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 RGS22Q8NE09 1264 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 MORC4Q8TE76 937 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 MTMR8Q96EF0 704 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 PPP4R2Q9NY27 417 aa16.85■□□□□ 0.29
PDAP1-204ENST00000496335 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
PDAP1-204ENST00000496335 ADD3Q9UEY8 706 aaKnown RBP16.85■□□□□ 0.29
PDAP1-204ENST00000496335 ZBTB5O15062 677 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 CYTH3O43739 400 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 C6orf222P0C671 652 aaPredicted RBP16.84■□□□□ 0.29
PDAP1-204ENST00000496335 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
PDAP1-204ENST00000496335 KCNA10Q16322 511 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms