RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 SYNRGQ9UMZ2 1314 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 SOX1O00570 391 aaPredicted RBP12.46□□□□□ -0.41
NELFE-213ENST00000494956 SGSM2O43147 1006 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 BAATQ14032 418 aaPredicted RBP12.46□□□□□ -0.41
NELFE-213ENST00000494956 TKFCQ3LXA3 575 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 CCDC144BQ3MJ40 725 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 TRIM60Q495X7 471 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 SLC30A10Q6XR72 485 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 EEPD1Q7L9B9 569 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 DGKHQ86XP1 1220 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 KATNBL1Q9H079 304 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 KAT14Q9H8E8 782 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 SENP2Q9HC62 589 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 CYP39A1Q9NYL5 469 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 DNAH12Q6ZR08 3092 aa12.46□□□□□ -0.41
NELFE-213ENST00000494956 LTBP2Q14767 1821 aa12.46□□□□□ -0.42
NELFE-213ENST00000494956 RAD50Q92878 1312 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 PTPDC1A2A3K4 754 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
NELFE-213ENST00000494956 USH1GQ495M9 461 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
NELFE-213ENST00000494956 STAG2Q8N3U4 1231 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 MSL3Q8N5Y2 521 aaKnown RBP12.45□□□□□ -0.42
NELFE-213ENST00000494956 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 CLEC4DQ8WXI8 215 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 KRT23Q9C075 422 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 FAM184BQ9ULE4 1060 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 PHF24Q9UPV7 400 aa12.45□□□□□ -0.42
NELFE-213ENST00000494956 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
NELFE-213ENST00000494956 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 CALML3P27482 149 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 SEC23AQ15436 765 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
NELFE-213ENST00000494956 TBC1D5Q92609 795 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 ANKS1AQ92625 1134 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 ABHD16BQ9H3Z7 469 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 VAT1LQ9HCJ6 419 aa12.44□□□□□ -0.42
NELFE-213ENST00000494956 CTAGE5O15320 804 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 BEX3Q00994 111 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 KCNA10Q16322 511 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 IFIT1BQ5T764 474 aaKnown RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 CCSAPQ6IQ19 270 aaPredicted RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 RNF180Q86T96 592 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 ADGRF4Q8IZF3 695 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 KLHDC9Q8NEP7 349 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 UBAC1Q9BSL1 405 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 CNNM2Q9H8M5 875 aa12.43□□□□□ -0.42
NELFE-213ENST00000494956 PRDM5Q9NQX1 630 aaPredicted RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 RBM8AQ9Y5S9 174 aaKnown RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 BAZ2BQ9UIF8 2168 aaKnown RBP12.43□□□□□ -0.42
NELFE-213ENST00000494956 TRIM43BA6NCK2 446 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 E7EWF7 191 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 ABCB7O75027 752 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 DUSP11O75319 330 aaKnown RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 SMPD1P17405 629 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 ITGB8P26012 769 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 ALDH5A1P51649 535 aaPredicted RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 ACLYP53396 1101 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 ANTXR2P58335 489 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 TLE2Q04725 743 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 SNX17Q15036 470 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 SLC35G1Q2M3R5 365 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 CCDC178Q5BJE1 867 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 TAPT1Q6NXT6 567 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 TRIM43Q96BQ3 446 aaPredicted RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 UBE2OQ9C0C9 1292 aaKnown RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
NELFE-213ENST00000494956 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
NELFE-213ENST00000494956 ASB14A6NK59 587 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 ASGR1P07306 291 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 PARP1P09874 1014 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 BMP8BP34820 402 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 RPS6P62753 249 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 TNFAIP2Q03169 654 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 RNF207Q6ZRF8 634 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 MAP4K1Q92918 833 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 LSG1Q9H089 658 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
NELFE-213ENST00000494956 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
NELFE-213ENST00000494956 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
NELFE-213ENST00000494956 IFIT3O14879 490 aaKnown RBP12.4□□□□□ -0.42
NELFE-213ENST00000494956 PPP1R11O60927 126 aaPredicted RBP12.4□□□□□ -0.42
NELFE-213ENST00000494956 GJA9P57773 515 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms