RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ATP11BQ9Y2G3 1177 aa18.28■□□□□ 0.52
LIMS2-216ENST00000494613 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
LIMS2-216ENST00000494613 TNKSO95271 1327 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 NFIBO00712 420 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
LIMS2-216ENST00000494613 TRDNQ13061 729 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 KCNA10Q16322 511 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 PNMA2Q9UL42 364 aa18.27■□□□□ 0.52
LIMS2-216ENST00000494613 ASTN1O14525 1302 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 A0A1W2PPC1 479 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 ADCY6O43306 1168 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 SEC23AQ15436 765 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
LIMS2-216ENST00000494613 C1orf53Q5VUE5 145 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 CCSAPQ6IQ19 270 aaPredicted RBP18.26■□□□□ 0.51
LIMS2-216ENST00000494613 ADGRF4Q8IZF3 695 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 VAT1LQ9HCJ6 419 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 TAF6LQ9Y6J9 622 aa18.26■□□□□ 0.51
LIMS2-216ENST00000494613 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 E7EWF7 191 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 PARP1P09874 1014 aaKnown RBP18.25■□□□□ 0.51
LIMS2-216ENST00000494613 ACLYP53396 1101 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 MDM2Q00987 491 aaPredicted RBP18.25■□□□□ 0.51
LIMS2-216ENST00000494613 TNFAIP2Q03169 654 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 SNX17Q15036 470 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 TRIM60Q495X7 471 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 IQSEC1Q6DN90 963 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 SKAP1Q86WV1 359 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
LIMS2-216ENST00000494613 SYNRGQ9UMZ2 1314 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 FRMPD3Q5JV73 1810 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-216ENST00000494613 A0A1W2PQ45 241 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-216ENST00000494613 A0A1W2PQY0 241 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 MYADML2A6NDP7 307 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 GJA9P57773 515 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 ASPRV1Q53RT3 343 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 GNASQ5JWF2 1037 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 TAPT1Q6NXT6 567 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 RNF207Q6ZRF8 634 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-216ENST00000494613 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 STAG2Q8N3U4 1231 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 MORC4Q8TE76 937 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 UBE2OQ9C0C9 1292 aaKnown RBP18.24■□□□□ 0.51
LIMS2-216ENST00000494613 SPC25Q9HBM1 224 aa18.24■□□□□ 0.51
LIMS2-216ENST00000494613 ADD3Q9UEY8 706 aaKnown RBP18.24■□□□□ 0.51
LIMS2-216ENST00000494613 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 TRIOBPQ9H2D6 2365 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 C6orf222P0C671 652 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 CALML3P27482 149 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 RPS6P62753 249 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 TLE2Q04725 743 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 USH1GQ495M9 461 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 KIAA1211Q6ZU35 1233 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 RGS22Q8NE09 1264 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 TBC1D5Q92609 795 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 LBHD1Q9BQE6 289 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 UPF3AQ9H1J1 476 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 PRKAG2Q9UGJ0 569 aa18.23■□□□□ 0.51
LIMS2-216ENST00000494613 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 RANBP2P49792 3224 aaKnown RBP18.23■□□□□ 0.51
LIMS2-216ENST00000494613 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 CTAGE5O15320 804 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 ASGR1P07306 291 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 CST5P28325 142 aaPredicted RBP18.22■□□□□ 0.51
LIMS2-216ENST00000494613 TMEM63BQ5T3F8 832 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 STOX1Q6ZVD7 989 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 CHST3Q7LGC8 479 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 SH3RF1Q7Z6J0 888 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
LIMS2-216ENST00000494613 VTI1AQ96AJ9 217 aa18.22■□□□□ 0.51
LIMS2-216ENST00000494613 GNEQ9Y223 722 aaKnown RBP18.22■□□□□ 0.51
LIMS2-216ENST00000494613 TRIM43BA6NCK2 446 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 KLRF2D3W0D1 207 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 DYNC1LI2O43237 492 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 SMPD1P17405 629 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 ALDH5A1P51649 535 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 NKX3-2P78367 333 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 RALYLQ86SE5 291 aaKnown RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 IGDCC4Q8TDY8 1250 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 TRIM43Q96BQ3 446 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 ESYT1Q9BSJ8 1104 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
LIMS2-216ENST00000494613 SENP2Q9HC62 589 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 STARD7Q9NQZ5 370 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.51
LIMS2-216ENST00000494613 LOC102724159A0A0B4J2E5 919 aa18.2■□□□□ 0.5
LIMS2-216ENST00000494613 ERICH2A1L162 156 aa18.2■□□□□ 0.5
LIMS2-216ENST00000494613 PALM3A6NDB9 673 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-216ENST00000494613 SOX1O00570 391 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms