RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 GOLGA8HP0CJ92 632 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 ACVR2BQ13705 512 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 RALYLQ86SE5 291 aaKnown RBP15.41■□□□□ 0.06
ERCC3-209ENST00000494464 RNF180Q86T96 592 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 RBM8AQ9Y5S9 174 aaKnown RBP15.41■□□□□ 0.06
ERCC3-209ENST00000494464 ASTN1O14525 1302 aa15.41■□□□□ 0.06
ERCC3-209ENST00000494464 RANBP2P49792 3224 aaKnown RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 LOC102724159A0A0B4J2E5 919 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 NFIBO00712 420 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 PARP1P09874 1014 aaKnown RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 SNX17Q15036 470 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 PWP2Q15269 919 aaKnown RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 CLEC4DQ8WXI8 215 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 LENG1Q96BZ8 264 aaPredicted RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
ERCC3-209ENST00000494464 ESYT1Q9BSJ8 1104 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 TAF6LQ9Y6J9 622 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 SYNRGQ9UMZ2 1314 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 LTBP2Q14767 1821 aa15.4■□□□□ 0.06
ERCC3-209ENST00000494464 A0A1W2PPC1 479 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 PGK1P00558 417 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 C1orf53Q5VUE5 145 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 STOX1Q6ZVD7 989 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 MORC4Q8TE76 937 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 MAF1Q9H063 256 aa15.39■□□□□ 0.05
ERCC3-209ENST00000494464 LSG1Q9H089 658 aaKnown RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 RBM27Q9P2N5 1060 aaKnown RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 ADD3Q9UEY8 706 aaKnown RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 ZMYND8Q9ULU4 1186 aaPredicted RBP15.39■□□□□ 0.05
ERCC3-209ENST00000494464 ADCY6O43306 1168 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-209ENST00000494464 BAATQ14032 418 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-209ENST00000494464 SART3Q15020 963 aaKnown RBP15.38■□□□□ 0.05
ERCC3-209ENST00000494464 MB21D2Q8IYB1 491 aaPredicted RBP15.38■□□□□ 0.05
ERCC3-209ENST00000494464 ADGRF4Q8IZF3 695 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 KLHDC9Q8NEP7 349 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 GDF15Q99988 308 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 UBA5Q9GZZ9 404 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 UPF3AQ9H1J1 476 aaKnown RBP15.38■□□□□ 0.05
ERCC3-209ENST00000494464 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
ERCC3-209ENST00000494464 ERICH2A1L162 156 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 PTPDC1A2A3K4 754 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
ERCC3-209ENST00000494464 MYCNP04198 464 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-209ENST00000494464 BMP8BP34820 402 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 ADCYAP1R1P41586 468 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-209ENST00000494464 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
ERCC3-209ENST00000494464 RTP1P59025 263 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 NKX3-2P78367 333 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 SLC30A10Q6XR72 485 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 SLC39A5Q6ZMH5 540 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 RGS22Q8NE09 1264 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 MTA3Q9BTC8 594 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 ABCB11O95342 1321 aa15.37■□□□□ 0.05
ERCC3-209ENST00000494464 A0A1W2PQ45 241 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 A0A1W2PQY0 241 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 SYN1P17600 705 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 GJA9P57773 515 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 ANTXR2P58335 489 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 RPS6P62753 249 aaKnown RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 USH1GQ495M9 461 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 CCSAPQ6IQ19 270 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 RNF207Q6ZRF8 634 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 VTA1Q9NP79 307 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 TRIOBPQ9H2D6 2365 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 GRM4Q14833 912 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 WTAPQ15007 396 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 NECTIN1Q15223 517 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 QRICH1Q2TAL8 776 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 STAG2Q8N3U4 1231 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 DNERQ8NFT8 737 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 FERMT2Q96AC1 680 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 PURBQ96QR8 312 aaKnown RBP15.36■□□□□ 0.05
ERCC3-209ENST00000494464 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
ERCC3-209ENST00000494464 MYADML2A6NDP7 307 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 KLRF2D3W0D1 207 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 SLC27A2O14975 620 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 DHX16O60231 1041 aaKnown RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 EIF5BO60841 1220 aaKnown RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 CDC45O75419 566 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 C6orf222P0C671 652 aaPredicted RBP15.35■□□□□ 0.05
ERCC3-209ENST00000494464 EDNRBP24530 442 aa15.35■□□□□ 0.05
ERCC3-209ENST00000494464 CALML3P27482 149 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms