RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MCM5P33992 734 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 TROAPQ12815 778 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 GRM4Q14833 912 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 ANO1Q5XXA6 986 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 CCDC144CPQ8IYA2 1237 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 STAG2Q8N3U4 1231 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 ABHD16BQ9H3Z7 469 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 JMJD4Q9H9V9 463 aa26.39■■□□□ 1.82
SNIP1-203ENST00000493916 LCTP09848 1927 aa26.39■■□□□ 1.81
SNIP1-203ENST00000493916 ASTN1O14525 1302 aa26.39■■□□□ 1.81
SNIP1-203ENST00000493916 KLRF2D3W0D1 207 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 PRC1O43663 620 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 RARBP10826 455 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 ACVR2BQ13705 512 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 LY9Q9HBG7 655 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 ZHX1Q9UKY1 873 aaPredicted RBP26.38■■□□□ 1.81
SNIP1-203ENST00000493916 SMCHD1A6NHR9 2005 aa26.38■■□□□ 1.81
SNIP1-203ENST00000493916 ALPK3Q96L96 1907 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 LRRC37A2A6NM11 1700 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 H0YGN5 161 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 BAATQ14032 418 aaPredicted RBP26.37■■□□□ 1.81
SNIP1-203ENST00000493916 QRICH1Q2TAL8 776 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 CATIPQ7Z7H3 387 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 MTMR8Q96EF0 704 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 TMEM87BQ96K49 555 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 MAF1Q9H063 256 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 KATNBL1Q9H079 304 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 XPNPEP3Q9NQH7 507 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 FAM184BQ9ULE4 1060 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 NR2E3Q9Y5X4 410 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 ABCB11O95342 1321 aa26.37■■□□□ 1.81
SNIP1-203ENST00000493916 LOC102724159A0A0B4J2E5 919 aa26.36■■□□□ 1.81
SNIP1-203ENST00000493916 DHX16O60231 1041 aaKnown RBP26.36■■□□□ 1.81
SNIP1-203ENST00000493916 EVI5O60447 810 aa26.36■■□□□ 1.81
SNIP1-203ENST00000493916 PWP2Q15269 919 aaKnown RBP26.36■■□□□ 1.81
SNIP1-203ENST00000493916 USH1GQ495M9 461 aa26.36■■□□□ 1.81
SNIP1-203ENST00000493916 RGS22Q8NE09 1264 aa26.36■■□□□ 1.81
SNIP1-203ENST00000493916 PTPDC1A2A3K4 754 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 KBTBD13C9JR72 458 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 SH2B2O14492 632 aaPredicted RBP26.35■■□□□ 1.81
SNIP1-203ENST00000493916 LRRC41Q15345 812 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 TSGA10IPQ3SY00 556 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 GJC2Q5T442 439 aaPredicted RBP26.35■■□□□ 1.81
SNIP1-203ENST00000493916 SLC30A10Q6XR72 485 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 RNF207Q6ZRF8 634 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 MORC4Q8TE76 937 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 MAP3K14Q99558 947 aa26.35■■□□□ 1.81
SNIP1-203ENST00000493916 ADD3Q9UEY8 706 aaKnown RBP26.35■■□□□ 1.81
SNIP1-203ENST00000493916 DDAH1O94760 285 aa26.34■■□□□ 1.81
SNIP1-203ENST00000493916 COL9A3Q14050 684 aaPredicted RBP26.34■■□□□ 1.81
SNIP1-203ENST00000493916 FBXO11Q86XK2 927 aa26.34■■□□□ 1.81
SNIP1-203ENST00000493916 TMTC2Q8N394 836 aa26.34■■□□□ 1.81
SNIP1-203ENST00000493916 VAT1LQ9HCJ6 419 aa26.34■■□□□ 1.81
SNIP1-203ENST00000493916 GPHNQ9NQX3 736 aaPredicted RBP26.34■■□□□ 1.81
SNIP1-203ENST00000493916 DNAH12Q6ZR08 3092 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 MCM3APO60318 1980 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 LIFRP42702 1097 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 RPS6P62753 249 aaKnown RBP26.33■■□□□ 1.81
SNIP1-203ENST00000493916 CCDC144BQ3MJ40 725 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 ZNF654Q8IZM8 581 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 LENG1Q96BZ8 264 aaPredicted RBP26.33■■□□□ 1.81
SNIP1-203ENST00000493916 PURBQ96QR8 312 aaKnown RBP26.33■■□□□ 1.81
SNIP1-203ENST00000493916 RIOX1Q9H6W3 641 aa26.33■■□□□ 1.81
SNIP1-203ENST00000493916 ZBTB5O15062 677 aa26.32■■□□□ 1.8
SNIP1-203ENST00000493916 DUSP11O75319 330 aaKnown RBP26.32■■□□□ 1.8
SNIP1-203ENST00000493916 ALDH5A1P51649 535 aaPredicted RBP26.32■■□□□ 1.8
SNIP1-203ENST00000493916 SLC35G1Q2M3R5 365 aa26.32■■□□□ 1.8
SNIP1-203ENST00000493916 RNF180Q86T96 592 aa26.32■■□□□ 1.8
SNIP1-203ENST00000493916 AMNQ9BXJ7 453 aa26.32■■□□□ 1.8
SNIP1-203ENST00000493916 SENP6Q9GZR1 1112 aaPredicted RBP26.32■■□□□ 1.8
SNIP1-203ENST00000493916 MRPL11Q9Y3B7 192 aaKnown RBP26.32■■□□□ 1.8
SNIP1-203ENST00000493916 ADAMTS4O75173 837 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 PGK1P00558 417 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 CALML3P27482 149 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 KRT32Q14532 448 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 LRRC26Q2I0M4 334 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 RASEFQ8IZ41 740 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 DNERQ8NFT8 737 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 NEK1Q96PY6 1258 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 SYNRGQ9UMZ2 1314 aa26.31■■□□□ 1.8
SNIP1-203ENST00000493916 ADCY6O43306 1168 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 KIF5BP33176 963 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 NFXL1Q6ZNB6 911 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 MCF2L2Q86YR7 1114 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 C7orf61Q8IZ16 206 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 NUP133Q8WUM0 1156 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 KCNB2Q92953 911 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 VTA1Q9NP79 307 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 PHF24Q9UPV7 400 aa26.3■■□□□ 1.8
SNIP1-203ENST00000493916 CCDC69A6NI79 296 aa26.29■■□□□ 1.8
SNIP1-203ENST00000493916 CYTH3O43739 400 aa26.29■■□□□ 1.8
SNIP1-203ENST00000493916 PPP1R11O60927 126 aaPredicted RBP26.29■■□□□ 1.8
SNIP1-203ENST00000493916 REC8O95072 547 aa26.29■■□□□ 1.8
SNIP1-203ENST00000493916 MYCNP04198 464 aaPredicted RBP26.29■■□□□ 1.8
SNIP1-203ENST00000493916 SGMS1Q86VZ5 419 aa26.29■■□□□ 1.8
SNIP1-203ENST00000493916 CTCFLQ8NI51 663 aaPredicted RBP26.29■■□□□ 1.8
SNIP1-203ENST00000493916 MYL10Q9BUA6 226 aa26.29■■□□□ 1.8
SNIP1-203ENST00000493916 UPF3AQ9H1J1 476 aaKnown RBP26.29■■□□□ 1.8
SNIP1-203ENST00000493916 DDX49Q9Y6V7 483 aaKnown RBP26.29■■□□□ 1.8
SNIP1-203ENST00000493916 MYH6P13533 1939 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms