RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CCDC6Q16204 474 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 PACS2Q86VP3 889 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 SEC31BQ9NQW1 1179 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 PACSIN2Q9UNF0 486 aaPredicted RBP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 VWDEQ8N2E2 1590 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 GJC1P36383 396 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 ERVK-24P63145 666 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 CCDC170Q8IYT3 715 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 NCAPGQ9BPX3 1015 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 AP1M1Q9BXS5 423 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 EHD2Q9NZN4 543 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 LGALS16A8MUM7 142 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 EXOC5O00471 708 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 GCKP35557 465 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 PDE6BP35913 854 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 PICALMQ13492 652 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 HIBCHQ6NVY1 386 aaPredicted RBP14.17□□□□□ -0.14
SHOX2-205ENST00000490689 DUSP10Q9Y6W6 482 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 USP31Q70CQ4 1352 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 F8W031 263 aaPredicted RBP14.17□□□□□ -0.14
SHOX2-205ENST00000490689 CYP27B1O15528 508 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 FNBP4Q8N3X1 1017 aaPredicted RBP14.17□□□□□ -0.14
SHOX2-205ENST00000490689 ANKRD42Q8N9B4 389 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 PROCA1Q8NCQ7 364 aaPredicted RBP14.17□□□□□ -0.14
SHOX2-205ENST00000490689 TBC1D5Q92609 795 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 EHD4Q9H223 541 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 RASAL2Q9UJF2 1139 aa14.17□□□□□ -0.14
SHOX2-205ENST00000490689 NOVA2Q9UNW9 492 aaKnown RBP14.17□□□□□ -0.14
SHOX2-205ENST00000490689 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 LONP1P36776 959 aaKnown RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 PDIA6Q15084 440 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 RABL6Q3YEC7 729 aaPredicted RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 ZNF579Q8NAF0 562 aaKnown RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 FBF1Q8TES7 1133 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 HNRNPLLQ8WVV9 542 aaKnown RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 PCDH11XQ9BZA7 1347 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 PCDH11YQ9BZA8 1340 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 MYO1FO00160 1098 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 SEC24CP53992 1094 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 CCNI2Q6ZMN8 369 aaPredicted RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 SPATA4Q8NEY3 305 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 IL17RAQ96F46 866 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 ADAMTS1Q9UHI8 967 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 TSKSQ9UJT2 592 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 HPSEQ9Y251 543 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 CEP170BQ9Y4F5 1589 aaPredicted RBP14.16□□□□□ -0.14
SHOX2-205ENST00000490689 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 CETN3O15182 167 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 NEDD9Q14511 834 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 HPS3Q969F9 1004 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 MS4A14Q96JA4 679 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 ASAP1Q9ULH1 1129 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 ATP8A1Q9Y2Q0 1164 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
SHOX2-205ENST00000490689 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 IGDCC4Q8TDY8 1250 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 KIFC2Q96AC6 838 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 SLC24A3Q9HC58 644 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 MTRF1LQ9UGC7 380 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 ERBB3P21860 1342 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 NBPF26B4DH59 902 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 NMT2O60551 498 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 GUCY2CP25092 1073 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 CALCRLQ16602 461 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 NBPF10Q6P3W6 841 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 EMBQ6PCB8 327 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 TMC4Q7Z404 712 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 NBPF15Q8N660 670 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 U2AF1L4Q8WU68 220 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 KANSL2Q9H9L4 492 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 INTS13Q9NVM9 706 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 SWAP70Q9UH65 585 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 NEO1Q92859 1461 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 CTNND1O60716 968 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 PLCG1P19174 1290 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 ALS2CLQ60I27 953 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 TRIM68Q6AZZ1 485 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 PLAAQ9Y263 795 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 SEMA3EO15041 775 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 RGS16O15492 202 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 PCK1P35558 622 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 LACTBP83111 547 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 GFPT1Q06210 699 aaPredicted RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 ADCY1Q08828 1119 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 FAM133BQ5BKY9 247 aaKnown RBP14.15□□□□□ -0.14
SHOX2-205ENST00000490689 CCDC65Q8IXS2 484 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 OSBPL9Q96SU4 736 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 CPVLQ9H3G5 476 aa14.15□□□□□ -0.14
SHOX2-205ENST00000490689 SLCO1A2P46721 670 aa14.14□□□□□ -0.15
SHOX2-205ENST00000490689 KLK7P49862 253 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms