RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 ZNF792Q3KQV3 632 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 MUM1L1Q5H9M0 696 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 MAP3K21Q5TCX8 1036 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 OLFML2BQ68BL8 750 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 MICU3Q86XE3 530 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 TRIB2Q92519 343 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 ABHD8Q96I13 439 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 MMP19Q99542 508 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 C22orf23Q9BZE7 217 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 RNF146Q9NTX7 359 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 PFASO15067 1338 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 ABCB11O95342 1321 aa10.3□□□□□ -0.76
SMKR1-202ENST00000488846 HMGCRP04035 888 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 ATXN8OSP0DMR3 200 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 ALAS1P13196 640 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 CYP2B6P20813 491 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 PDIA3P30101 505 aaKnown RBP10.29□□□□□ -0.76
SMKR1-202ENST00000488846 CDC27P30260 824 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 FGD1P98174 961 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 TRAF1Q13077 416 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 KCTD2Q14681 263 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 NTRK3Q16288 839 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 RTN1Q16799 776 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 SLC9C1Q4G0N8 1177 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 WDR78Q5VTH9 848 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 MAMDC4Q6UXC1 1216 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
SMKR1-202ENST00000488846 FBXO11Q86XK2 927 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 MSL3Q8N5Y2 521 aaKnown RBP10.29□□□□□ -0.76
SMKR1-202ENST00000488846 SAMD3Q8N6K7 520 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 MAML3Q96JK9 1138 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 FGD4Q96M96 766 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 PIGSQ96S52 555 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 A1CFQ9NQ94 594 aaKnown RBP10.29□□□□□ -0.76
SMKR1-202ENST00000488846 PDRG1Q9NUG6 133 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 SLC5A4Q9NY91 659 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 CYP39A1Q9NYL5 469 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 FLRT1Q9NZU1 646 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
SMKR1-202ENST00000488846 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
SMKR1-202ENST00000488846 CCDC196A0A1B0GTZ2 297 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 NFIBO00712 420 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 OPLAHO14841 1288 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 ELNP15502 786 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 ADD1P35611 737 aaKnown RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 CCL14Q16627 93 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 DPP9Q86TI2 863 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 CCDC144CPQ8IYA2 1237 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 SH3TC2Q8TF17 1288 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 RRP36Q96EU6 259 aaKnown RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 TBC1D32Q96NH3 1257 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 AMNQ9BXJ7 453 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 VAT1LQ9HCJ6 419 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 HOMER2Q9NSB8 354 aa10.28□□□□□ -0.76
SMKR1-202ENST00000488846 MAP3K20Q9NYL2 800 aaKnown RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 MRPL11Q9Y3B7 192 aaKnown RBP10.28□□□□□ -0.76
SMKR1-202ENST00000488846 PLXNA1Q9UIW2 1896 aa10.27□□□□□ -0.76
SMKR1-202ENST00000488846 LCTP09848 1927 aa10.27□□□□□ -0.76
SMKR1-202ENST00000488846 MYH6P13533 1939 aa10.27□□□□□ -0.76
SMKR1-202ENST00000488846 LOC102724159A0A0B4J2E5 919 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 DHX16O60231 1041 aaKnown RBP10.27□□□□□ -0.77
SMKR1-202ENST00000488846 INHAP05111 366 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 PGK2P07205 417 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 IFNAR1P17181 557 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 HSD17B4P51659 736 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 NEK4P51957 841 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 AK2P54819 239 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 PWP2Q15269 919 aaKnown RBP10.27□□□□□ -0.77
SMKR1-202ENST00000488846 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 CMTR1Q8N1G2 835 aaKnown RBP10.27□□□□□ -0.77
SMKR1-202ENST00000488846 ANKRD35Q8N283 1001 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 MORC4Q8TE76 937 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 NRBP1Q9UHY1 535 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 PCDHA1Q9Y5I3 950 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 ASTN1O14525 1302 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 SYNGAP1Q96PV0 1343 aa10.27□□□□□ -0.77
SMKR1-202ENST00000488846 MKI67P46013 3256 aaKnown RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 SOWAHBA6NEL2 793 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 PFKFB2O60825 505 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 UBXN2AP68543 259 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 CNTN2Q02246 1040 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 CACNB2Q08289 660 aaPredicted RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 TRIM32Q13049 653 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 BAATQ14032 418 aaPredicted RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 USH1GQ495M9 461 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 HOMER1Q86YM7 354 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 MCF2L2Q86YR7 1114 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 TEX2Q8IWB9 1127 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms