RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 USH1GQ495M9 461 aa18.56■□□□□ 0.56
GABPA-203ENST00000487266 HABP4Q5JVS0 413 aaKnown RBP18.56■□□□□ 0.56
GABPA-203ENST00000487266 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
GABPA-203ENST00000487266 MSL3Q8N5Y2 521 aaKnown RBP18.56■□□□□ 0.56
GABPA-203ENST00000487266 KATNBL1Q9H079 304 aa18.56■□□□□ 0.56
GABPA-203ENST00000487266 XPNPEP3Q9NQH7 507 aa18.56■□□□□ 0.56
GABPA-203ENST00000487266 KBTBD13C9JR72 458 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 PTGS1P23219 599 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 ANTXR2P58335 489 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 TRDNQ13061 729 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 ACVR2BQ13705 512 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
GABPA-203ENST00000487266 SLC30A10Q6XR72 485 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 RALYLQ86SE5 291 aaKnown RBP18.55■□□□□ 0.56
GABPA-203ENST00000487266 STAG2Q8N3U4 1231 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 CLEC4DQ8WXI8 215 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 FERMT2Q96AC1 680 aa18.55■□□□□ 0.56
GABPA-203ENST00000487266 SYNRGQ9UMZ2 1314 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 MYADML2A6NDP7 307 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 PARP1P09874 1014 aaKnown RBP18.54■□□□□ 0.56
GABPA-203ENST00000487266 BAATQ14032 418 aaPredicted RBP18.54■□□□□ 0.56
GABPA-203ENST00000487266 ASPRV1Q53RT3 343 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 MB21D2Q8IYB1 491 aaPredicted RBP18.54■□□□□ 0.56
GABPA-203ENST00000487266 ADGRF4Q8IZF3 695 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 ARRDC4Q8NCT1 418 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 NCOA7Q8NI08 942 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 ANO2Q9NQ90 1003 aa18.54■□□□□ 0.56
GABPA-203ENST00000487266 RBM27Q9P2N5 1060 aaKnown RBP18.54■□□□□ 0.56
GABPA-203ENST00000487266 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.53■□□□□ 0.56
GABPA-203ENST00000487266 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 IFIT3O14879 490 aaKnown RBP18.53■□□□□ 0.56
GABPA-203ENST00000487266 ADAMTS4O75173 837 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 ADCYAP1R1P41586 468 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 CCDC144BQ3MJ40 725 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 KIAA1211Q6ZU35 1233 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 EEPD1Q7L9B9 569 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 FBXO16Q8IX29 292 aaPredicted RBP18.53■□□□□ 0.56
GABPA-203ENST00000487266 VAT1LQ9HCJ6 419 aa18.53■□□□□ 0.56
GABPA-203ENST00000487266 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
GABPA-203ENST00000487266 BAZ2BQ9UIF8 2168 aaKnown RBP18.52■□□□□ 0.56
GABPA-203ENST00000487266 WDR19Q8NEZ3 1342 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 LAMA3Q16787 3333 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 SLC27A2O14975 620 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
GABPA-203ENST00000487266 CALML3P27482 149 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 RTP1P59025 263 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 SLC35G1Q2M3R5 365 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 PRO3102Q9H379 93 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 ABHD16BQ9H3Z7 469 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 JMJD4Q9H9V9 463 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
GABPA-203ENST00000487266 LTBP2Q14767 1821 aa18.51■□□□□ 0.55
GABPA-203ENST00000487266 TMEM63BQ5T3F8 832 aa18.51■□□□□ 0.55
GABPA-203ENST00000487266 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
GABPA-203ENST00000487266 MAD2L2Q9UI95 211 aa18.51■□□□□ 0.55
GABPA-203ENST00000487266 ALDH5A1P51649 535 aaPredicted RBP18.5■□□□□ 0.55
GABPA-203ENST00000487266 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
GABPA-203ENST00000487266 GRM4Q14833 912 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 WTAPQ15007 396 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 TMEM67Q5HYA8 995 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 CREB3L3Q68CJ9 461 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 RNF207Q6ZRF8 634 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 PHF24Q9UPV7 400 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 ATP11BQ9Y2G3 1177 aa18.5■□□□□ 0.55
GABPA-203ENST00000487266 A0A1W2PQ45 241 aaPredicted RBP18.49■□□□□ 0.55
GABPA-203ENST00000487266 A0A1W2PQY0 241 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 ERICH2A1L162 156 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 ASB14A6NK59 587 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 CDC45O75419 566 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 TRIM60Q495X7 471 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 SLC39A5Q6ZMH5 540 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 RNF180Q86T96 592 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 IGDCC4Q8TDY8 1250 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 TBC1D5Q92609 795 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
GABPA-203ENST00000487266 PALM3A6NDB9 673 aaPredicted RBP18.48■□□□□ 0.55
GABPA-203ENST00000487266 PRC1O43663 620 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
GABPA-203ENST00000487266 DUSP11O75319 330 aaKnown RBP18.48■□□□□ 0.55
GABPA-203ENST00000487266 NEFLP07196 543 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
GABPA-203ENST00000487266 MAGEA10P43363 369 aaPredicted RBP18.48■□□□□ 0.55
GABPA-203ENST00000487266 SNX17Q15036 470 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 NECTIN1Q15223 517 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 KLHDC9Q8NEP7 349 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 LRRC2Q9BYS8 371 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 LY9Q9HBG7 655 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
GABPA-203ENST00000487266 SLC34A2O95436 690 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 SMPD1P17405 629 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 FXR1P51114 621 aaKnown RBP eCLIP18.47■□□□□ 0.55
GABPA-203ENST00000487266 TROAPQ12815 778 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 SART3Q15020 963 aaKnown RBP18.47■□□□□ 0.55
GABPA-203ENST00000487266 CCSAPQ6IQ19 270 aaPredicted RBP18.47■□□□□ 0.55
GABPA-203ENST00000487266 TAPT1Q6NXT6 567 aa18.47■□□□□ 0.55
GABPA-203ENST00000487266 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
GABPA-203ENST00000487266 HOMER1Q86YM7 354 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms