RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MAP4K1Q92918 833 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 ATP11BQ9Y2G3 1177 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 PLXNA1Q9UIW2 1896 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 WDR19Q8NEZ3 1342 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 SYNRGQ9UMZ2 1314 aa21.55■■□□□ 1.04
PRPF40A-209ENST00000486100 NFIBO00712 420 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 SEC23AQ15436 765 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 ASPRV1Q53RT3 343 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 IFIT1BQ5T764 474 aaKnown RBP21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 CYB5R4Q7L1T6 521 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 CLEC4DQ8WXI8 215 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 ASTN1O14525 1302 aa21.54■■□□□ 1.04
PRPF40A-209ENST00000486100 CCSAPQ6IQ19 270 aaPredicted RBP21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 PURBQ96QR8 312 aaKnown RBP21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 CPVLQ9H3G5 476 aa21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 SPC25Q9HBM1 224 aa21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 ADD3Q9UEY8 706 aaKnown RBP21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 PRKAG2Q9UGJ0 569 aa21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 SMCHD1A6NHR9 2005 aa21.53■■□□□ 1.04
PRPF40A-209ENST00000486100 A0A1W2PQ45 241 aaPredicted RBP21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 A0A1W2PQY0 241 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 PTPDC1A2A3K4 754 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 MOXD2PA6NHM9 499 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 ADCY6O43306 1168 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 PARP1P09874 1014 aaKnown RBP21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 CST5P28325 142 aaPredicted RBP21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 ACLYP53396 1101 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 GJA9P57773 515 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 KCNA10Q16322 511 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 TRIM60Q495X7 471 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 ADGRF4Q8IZF3 695 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 MORC4Q8TE76 937 aa21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
PRPF40A-209ENST00000486100 LAMA4Q16363 1823 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 LOC102724159A0A0B4J2E5 919 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 E7EWF7 191 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 C6orf222P0C671 652 aaPredicted RBP21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 TNFAIP2Q03169 654 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 PWP2Q15269 919 aaKnown RBP21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 RNF207Q6ZRF8 634 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 PCSK9Q8NBP7 692 aaKnown RBP21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 RGS22Q8NE09 1264 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 NCOA7Q8NI08 942 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 NUP133Q8WUM0 1156 aa21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 UBE2OQ9C0C9 1292 aaKnown RBP21.51■■□□□ 1.03
PRPF40A-209ENST00000486100 MYADML2A6NDP7 307 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 ALDH5A1P51649 535 aaPredicted RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 NKX3-2P78367 333 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 MDM2Q00987 491 aaPredicted RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 CDC37Q16543 378 aaPredicted RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 IQSEC1Q6DN90 963 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 TAPT1Q6NXT6 567 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 KIAA1211Q6ZU35 1233 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 LBHD1Q9BQE6 289 aaPredicted RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 PCDH10Q9P2E7 1040 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 DDX49Q9Y6V7 483 aaKnown RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 RANBP2P49792 3224 aaKnown RBP21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 TRIOBPQ9H2D6 2365 aa21.5■■□□□ 1.03
PRPF40A-209ENST00000486100 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 IFIT3O14879 490 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 CALML3P27482 149 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 RPS6P62753 249 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 IRX5P78411 483 aaPredicted RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 TLE2Q04725 743 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 USH1GQ495M9 461 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 GNASQ5JWF2 1037 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 NOL8Q76FK4 1167 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 EEPD1Q7L9B9 569 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 MAF1Q9H063 256 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 JMJD4Q9H9V9 463 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 VAT1LQ9HCJ6 419 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 VTA1Q9NP79 307 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 STARD7Q9NQZ5 370 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 GNEQ9Y223 722 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 RBM8AQ9Y5S9 174 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-209ENST00000486100 ERICH2A1L162 156 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 ASGR1P07306 291 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 SLC30A10Q6XR72 485 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 STOX1Q6ZVD7 989 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 FBXO16Q8IX29 292 aaPredicted RBP21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 TDHQ8IZJ6 230 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 STAG2Q8N3U4 1231 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 DNAH12Q6ZR08 3092 aa21.48■■□□□ 1.03
PRPF40A-209ENST00000486100 CTAGE5O15320 804 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 SMPD1P17405 629 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 SART3Q15020 963 aaKnown RBP21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 QRICH1Q2TAL8 776 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 DNERQ8NFT8 737 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 GLT1D1Q96MS3 346 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 ESYT1Q9BSJ8 1104 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 LSG1Q9H089 658 aaKnown RBP21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 PRDM5Q9NQX1 630 aaPredicted RBP21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 PDLIM7Q9NR12 457 aa21.47■■□□□ 1.03
PRPF40A-209ENST00000486100 MAD2L2Q9UI95 211 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms