RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 REPS2Q8NFH8 660 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ARMC5Q96C12 935 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 DDX11Q96FC9 970 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 AGBL1Q96MI9 1066 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 UBA5Q9GZZ9 404 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 SENP2Q9HC62 589 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 VAT1LQ9HCJ6 419 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ZNF214Q9UL59 606 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 CCPG1Q9ULG6 757 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ADAMTS5Q9UNA0 930 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 MCM3APO60318 1980 aa11.67□□□□□ -0.54
SPTLC1-206ENST00000482632 SZT2Q5T011 3432 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 HMGCRP04035 888 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 PGK2P07205 417 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 FDX1P10109 184 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 CCL5P13501 91 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 IRF5Q13568 498 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 GRB14Q14449 540 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 CCL14Q16627 93 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 RAB11FIP4Q86YS3 637 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 TRIB2Q92519 343 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 TCEANC2Q96MN5 208 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 JAKMIP1Q96N16 626 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 MYL10Q9BUA6 226 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 RNF208Q9H0X6 261 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 RNF146Q9NTX7 359 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 SLC5A4Q9NY91 659 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 RIPK3Q9Y572 518 aa11.66□□□□□ -0.54
SPTLC1-206ENST00000482632 RBBP6Q7Z6E9 1792 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 STRNO43815 780 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 PLA2G6O60733 806 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 TRIM32Q13049 653 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 ADCK5Q3MIX3 580 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 USH1GQ495M9 461 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 MFSD14CQ5VZR4 134 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 CCDC144CPQ8IYA2 1237 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 ZNF654Q8IZM8 581 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 NPLOC4Q8TAT6 608 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 PXYLP1Q8TE99 480 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 PIBF1Q8WXW3 757 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 TMEM87BQ96K49 555 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 UNC93B1Q9H1C4 597 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 LY9Q9HBG7 655 aa11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 KIAA0100Q14667 2235 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-206ENST00000482632 KLRF2D3W0D1 207 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 SNPHO15079 494 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 SNHG28P0DPA3 235 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 CPA1P15085 419 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 CNGA1P29973 690 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 OAZ1P54368 228 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 COL9A3Q14050 684 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 BTNL9Q6UXG8 535 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 NSMFQ6X4W1 530 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 TRMT44Q8IYL2 757 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 CTCFLQ8NI51 663 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 IGDCC4Q8TDY8 1250 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 RANBP17Q9H2T7 1088 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 FBXO40Q9UH90 709 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 SNX14Q9Y5W7 946 aa11.64□□□□□ -0.55
SPTLC1-206ENST00000482632 ATP2A1O14983 1001 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 COBLO75128 1261 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 ICAM1P05362 532 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 XRCC5P13010 732 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 RXRAP19793 462 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 CASTP20810 708 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 CYP2C19P33261 490 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 HSPA4P34932 840 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 GRM4Q14833 912 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 MUM1L1Q5H9M0 696 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 MICU3Q86XE3 530 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 ABRAQ8N0Z2 381 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 USP6NLQ92738 828 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 FLRT1Q9NZU1 646 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
SPTLC1-206ENST00000482632 ZNF536O15090 1300 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 CENPFP49454 3210 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 PTPDC1A2A3K4 754 aa11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
SPTLC1-206ENST00000482632 DDAH1O94760 285 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms