RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 NPLOC4Q8TAT6 608 aa11.41□□□□□ -0.58
NIFK-205ENST00000477693 TMEM87BQ96K49 555 aa11.41□□□□□ -0.58
NIFK-205ENST00000477693 JAKMIP1Q96N16 626 aaKnown RBP11.41□□□□□ -0.58
NIFK-205ENST00000477693 IPO9Q96P70 1041 aaKnown RBP11.41□□□□□ -0.58
NIFK-205ENST00000477693 MMP19Q99542 508 aa11.41□□□□□ -0.58
NIFK-205ENST00000477693 TMEM106CQ9BVX2 250 aa11.41□□□□□ -0.58
NIFK-205ENST00000477693 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
NIFK-205ENST00000477693 FBXO40Q9UH90 709 aa11.41□□□□□ -0.58
NIFK-205ENST00000477693 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 PRC1O43663 620 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 COBLO75128 1261 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 GJB1P08034 283 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 GOLGA8HP0CJ92 632 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 TRIM32Q13049 653 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 COL9A3Q14050 684 aaPredicted RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 KCTD2Q14681 263 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 TMEM67Q5HYA8 995 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 HSCBQ8IWL3 235 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 TMTC2Q8N394 836 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 ACAD9Q9H845 621 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 FLRT1Q9NZU1 646 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 PNMA2Q9UL42 364 aa11.4□□□□□ -0.58
NIFK-205ENST00000477693 DIS3Q9Y2L1 958 aaKnown RBP11.4□□□□□ -0.58
NIFK-205ENST00000477693 DNAJC25-GNG10A0A024R161 153 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 SH2B2O14492 632 aaPredicted RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 MYCP01106 439 aaPredicted RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 CAPN2P17655 700 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 RPS6KB1P23443 525 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 LIFRP42702 1097 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 GJA8P48165 433 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 SNAP25P60880 206 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 CACNB2Q08289 660 aaPredicted RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 TROAPQ12815 778 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 ZNF792Q3KQV3 632 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 MFSD14CQ5VZR4 134 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 CCDC174Q6PII3 467 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
NIFK-205ENST00000477693 RNF146Q9NTX7 359 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 PDRG1Q9NUG6 133 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 MAD2L2Q9UI95 211 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 CCPG1Q9ULG6 757 aa11.39□□□□□ -0.59
NIFK-205ENST00000477693 MKI67P46013 3256 aaKnown RBP11.38□□□□□ -0.59
NIFK-205ENST00000477693 PGK2P07205 417 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 ALAS1P13196 640 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 EN2P19622 333 aaPredicted RBP11.38□□□□□ -0.59
NIFK-205ENST00000477693 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
NIFK-205ENST00000477693 GRM4Q14833 912 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 ADCK5Q3MIX3 580 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 ADGRF4Q8IZF3 695 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 STAG2Q8N3U4 1231 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 SHISA4Q96DD7 197 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.38□□□□□ -0.59
NIFK-205ENST00000477693 CPVLQ9H3G5 476 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
NIFK-205ENST00000477693 HOMER2Q9NSB8 354 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
NIFK-205ENST00000477693 PFASO15067 1338 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 K7ELQ4 463 aaPredicted RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 DDAH1O94760 285 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 SGPL1O95470 568 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 CYBAP13498 195 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 FGD1P98174 961 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 MUM1L1Q5H9M0 696 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 MTMR8Q96EF0 704 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 DDX11Q96FC9 970 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 AGXT2Q9BYV1 514 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 A1CFQ9NQ94 594 aaKnown RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
NIFK-205ENST00000477693 NRBP1Q9UHY1 535 aa11.37□□□□□ -0.59
NIFK-205ENST00000477693 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
NIFK-205ENST00000477693 CALM1P0DP23 149 aa11.36□□□□□ -0.59
NIFK-205ENST00000477693 CALM2P0DP24 149 aa11.36□□□□□ -0.59
NIFK-205ENST00000477693 CALM3P0DP25 149 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms