RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 GOLPH3LQ9H4A5 285 aa11.12□□□□□ -0.63
ITGA6-210ENST00000475302 TMOD2Q9NZR1 351 aa11.12□□□□□ -0.63
ITGA6-210ENST00000475302 SLC27A5Q9Y2P5 690 aa11.12□□□□□ -0.63
ITGA6-210ENST00000475302 A0A1W2PRG0 241 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 WNT7AO00755 349 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 SPTLC2O15270 562 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 LMNB1P20700 586 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 KRT2P35908 639 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
ITGA6-210ENST00000475302 SAFBQ15424 915 aaKnown RBP eCLIP11.11□□□□□ -0.63
ITGA6-210ENST00000475302 ABCB5Q2M3G0 1257 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 RILPL1Q5EBL4 403 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 CCDC183Q5T5S1 534 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 LRSAM1Q6UWE0 723 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 ZSCAN29Q8IWY8 852 aaPredicted RBP11.11□□□□□ -0.63
ITGA6-210ENST00000475302 GMCL1P1Q8NEA9 526 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 ZMYND12Q9H0C1 365 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 BARHL2Q9NY43 387 aa11.11□□□□□ -0.63
ITGA6-210ENST00000475302 CNOT7Q9UIV1 285 aaKnown RBP11.11□□□□□ -0.63
ITGA6-210ENST00000475302 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 MYH4Q9Y623 1939 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 ESYT2A0FGR8 921 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 SYCE3A1L190 88 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 GDF11O95390 407 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 GH2P01242 217 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 XRCC6P12956 609 aaKnown RBP eCLIP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 XBP1P17861 261 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 TTBK2Q6IQ55 1244 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 GALNT17Q6IS24 598 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 HLA-CQ95604 372 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 SYAP1Q96A49 352 aaPredicted RBP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 PIGSQ96S52 555 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 UBA5Q9GZZ9 404 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 FBXO2Q9UK22 296 aaPredicted RBP11.1□□□□□ -0.63
ITGA6-210ENST00000475302 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
ITGA6-210ENST00000475302 GOLGA6L3A6NEY3 463 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 F5H6K3 240 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 MPHOSPH10O00566 681 aaKnown RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 MYO1BO43795 1136 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 LETM1O95202 739 aaPredicted RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 S1PR4O95977 384 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 ADH1BP00325 375 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 CMA1P23946 247 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 KLRC3Q07444 240 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 RASA3Q14644 834 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 STK38Q15208 465 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 KIAA1755Q5JYT7 1200 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 GPATCH4Q5T3I0 446 aaKnown RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 BTNL9Q6UXG8 535 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 CCAR1Q8IX12 1150 aaKnown RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 GPC2Q8N158 579 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 C4orf32Q8N8J7 132 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 RBSNQ9H1K0 784 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 CLSTN2Q9H4D0 955 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 DACT1Q9NYF0 836 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
ITGA6-210ENST00000475302 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
ITGA6-210ENST00000475302 hCG_1984214I3L0E3 225 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 EDIL3O43854 480 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 CALML3P27482 149 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 CAP2P40123 477 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 ME1P48163 572 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 TRAPPC10P48553 1259 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 HIRAP54198 1017 aaPredicted RBP11.08□□□□□ -0.64
ITGA6-210ENST00000475302 NLRP5P59047 1200 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 ICA1Q05084 483 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 PARP9Q8IXQ6 854 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 ADGRF4Q8IZF3 695 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 ZNF713Q8N859 430 aaPredicted RBP11.08□□□□□ -0.64
ITGA6-210ENST00000475302 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 RRP36Q96EU6 259 aaKnown RBP11.08□□□□□ -0.64
ITGA6-210ENST00000475302 GRPEL1Q9HAV7 217 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 ZBTB21Q9ULJ3 1066 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 PCDHA6Q9UN73 950 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 TMX2Q9Y320 296 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 PCDHA8Q9Y5H6 950 aa11.08□□□□□ -0.64
ITGA6-210ENST00000475302 BAZ2BQ9UIF8 2168 aaKnown RBP11.08□□□□□ -0.64
ITGA6-210ENST00000475302 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms