RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ZMYND8Q9ULU4 1186 aaPredicted RBP26.36■■□□□ 1.81
PTP4A1-203ENST00000473334 NFIBO00712 420 aa26.35■■□□□ 1.81
PTP4A1-203ENST00000473334 PGK1P00558 417 aa26.35■■□□□ 1.81
PTP4A1-203ENST00000473334 STOX1Q6ZVD7 989 aa26.35■■□□□ 1.81
PTP4A1-203ENST00000473334 RNF180Q86T96 592 aa26.35■■□□□ 1.81
PTP4A1-203ENST00000473334 LSG1Q9H089 658 aaKnown RBP26.35■■□□□ 1.81
PTP4A1-203ENST00000473334 ATN1P54259 1190 aaPredicted RBP26.34■■□□□ 1.81
PTP4A1-203ENST00000473334 BAATQ14032 418 aaPredicted RBP26.34■■□□□ 1.81
PTP4A1-203ENST00000473334 KATNBL1Q9H079 304 aa26.34■■□□□ 1.81
PTP4A1-203ENST00000473334 ASTN1O14525 1302 aa26.34■■□□□ 1.81
PTP4A1-203ENST00000473334 MYH6P13533 1939 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 ERICH2A1L162 156 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 IFIT3O14879 490 aaKnown RBP26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 ADAMTS4O75173 837 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 DUSP11O75319 330 aaKnown RBP26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 ADCYAP1R1P41586 468 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 CDC37Q16543 378 aaPredicted RBP26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 CCDC144BQ3MJ40 725 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 ADGRF4Q8IZF3 695 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 CLEC4DQ8WXI8 215 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 PRO3102Q9H379 93 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 SYNRGQ9UMZ2 1314 aa26.33■■□□□ 1.81
PTP4A1-203ENST00000473334 PTPDC1A2A3K4 754 aa26.32■■□□□ 1.8
PTP4A1-203ENST00000473334 SART3Q15020 963 aaKnown RBP26.32■■□□□ 1.8
PTP4A1-203ENST00000473334 RBM27Q9P2N5 1060 aaKnown RBP26.32■■□□□ 1.8
PTP4A1-203ENST00000473334 PHF24Q9UPV7 400 aa26.32■■□□□ 1.8
PTP4A1-203ENST00000473334 SYN1P17600 705 aa26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 WTAPQ15007 396 aa26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 USH1GQ495M9 461 aa26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 SLC39A5Q6ZMH5 540 aa26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 MB21D2Q8IYB1 491 aaPredicted RBP26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 PURBQ96QR8 312 aaKnown RBP26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 ANO2Q9NQ90 1003 aa26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 ADD3Q9UEY8 706 aaKnown RBP26.31■■□□□ 1.8
PTP4A1-203ENST00000473334 ADCY6O43306 1168 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 DHX16O60231 1041 aaKnown RBP26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 RTP1P59025 263 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 SLC30A10Q6XR72 485 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 RNF207Q6ZRF8 634 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 STAG2Q8N3U4 1231 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 FERMT2Q96AC1 680 aa26.3■■□□□ 1.8
PTP4A1-203ENST00000473334 LOC102724159A0A0B4J2E5 919 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 NEFLP07196 543 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 ALDH5A1P51649 535 aaPredicted RBP26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 ANTXR2P58335 489 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 PWP2Q15269 919 aaKnown RBP26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 CHST3Q7LGC8 479 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 KLHDC9Q8NEP7 349 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 MORC4Q8TE76 937 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 TSEN34Q9BSV6 310 aaKnown RBP26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 JMJD4Q9H9V9 463 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 MAD2L2Q9UI95 211 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 ABCB11O95342 1321 aa26.29■■□□□ 1.8
PTP4A1-203ENST00000473334 KLRF2D3W0D1 207 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 SLC27A2O14975 620 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 CALML3P27482 149 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 RPS6P62753 249 aaKnown RBP26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 SNX17Q15036 470 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 QRICH1Q2TAL8 776 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 TMEM67Q5HYA8 995 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 CASC1Q6TDU7 716 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 GDF15Q99988 308 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 UPF3AQ9H1J1 476 aaKnown RBP26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 SPC25Q9HBM1 224 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 VAT1LQ9HCJ6 419 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 ATP11BQ9Y2G3 1177 aa26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 DDX49Q9Y6V7 483 aaKnown RBP26.28■■□□□ 1.8
PTP4A1-203ENST00000473334 RANBP2P49792 3224 aaKnown RBP26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 A0A1W2PQ45 241 aaPredicted RBP26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 A0A1W2PQY0 241 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 PALM3A6NDB9 673 aaPredicted RBP26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 CST5P28325 142 aaPredicted RBP26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 GJA9P57773 515 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 GRM4Q14833 912 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 CREB3L3Q68CJ9 461 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 FBXO16Q8IX29 292 aaPredicted RBP26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 RGS22Q8NE09 1264 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 MAF1Q9H063 256 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 SENP2Q9HC62 589 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 VTA1Q9NP79 307 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 TRIOBPQ9H2D6 2365 aa26.27■■□□□ 1.8
PTP4A1-203ENST00000473334 MOXD2PA6NHM9 499 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 CDC45O75419 566 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 C6orf222P0C671 652 aaPredicted RBP26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 TNFAIP2Q03169 654 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 NECTIN1Q15223 517 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 C1orf53Q5VUE5 145 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 FBXO11Q86XK2 927 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 IGDCC4Q8TDY8 1250 aa26.26■■□□□ 1.79
PTP4A1-203ENST00000473334 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 A0A1W2PPC1 479 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 MYADML2A6NDP7 307 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 MAGEA10P43363 369 aaPredicted RBP26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 ACLYP53396 1101 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 KCNA10Q16322 511 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 TRIM60Q495X7 471 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 CCSAPQ6IQ19 270 aaPredicted RBP26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 EEPD1Q7L9B9 569 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 CATIPQ7Z7H3 387 aa26.25■■□□□ 1.79
PTP4A1-203ENST00000473334 MTA3Q9BTC8 594 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms