RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 RABGAP1Q9Y3P9 1069 aa13.37□□□□□ -0.27
FN1-217ENST00000471193 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
FN1-217ENST00000471193 OPLAHO14841 1288 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 HSPA6P17066 643 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 CALML3P27482 149 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
FN1-217ENST00000471193 VEGFBP49765 207 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 ADCY7P51828 1080 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 NLRP5P59047 1200 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 NUCB2P80303 420 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
FN1-217ENST00000471193 GALNT17Q6IS24 598 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 MORF4L1Q9UBU8 362 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 PCDHA4Q9UN74 947 aa13.36□□□□□ -0.27
FN1-217ENST00000471193 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
FN1-217ENST00000471193 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 PEX10O60683 326 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 ZSCAN22P10073 491 aaPredicted RBP13.35□□□□□ -0.27
FN1-217ENST00000471193 ALAS1P13196 640 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 KRT2P35908 639 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 STAT3P40763 770 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 TKFCQ3LXA3 575 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 RIOX2Q8IUF8 465 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 DIS3L2Q8IYB7 885 aaKnown RBP13.35□□□□□ -0.27
FN1-217ENST00000471193 CLEC4DQ8WXI8 215 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 BRMS1Q9HCU9 246 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 C6orf50Q9HD87 102 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 RIC8AQ9NPQ8 531 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 RNF146Q9NTX7 359 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 ZDHHC9Q9Y397 364 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
FN1-217ENST00000471193 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 M0R2N6 131 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 ADAMTS3O15072 1205 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 F13A1P00488 732 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 GNA11P29992 359 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 COPB2P35606 906 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 MAP2K2P36507 400 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 ERVK-24P63145 666 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 GHRHRQ02643 423 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 RESTQ13127 1097 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 PLS1Q14651 629 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 SAFBQ15424 915 aaKnown RBP eCLIP13.34□□□□□ -0.27
FN1-217ENST00000471193 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 BLIDQ8IZY5 108 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 CUL5Q93034 780 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 TNFRSF25Q93038 417 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 MOV10L1Q9BXT6 1211 aaKnown RBP13.34□□□□□ -0.27
FN1-217ENST00000471193 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
FN1-217ENST00000471193 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
FN1-217ENST00000471193 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 NFIBO00712 420 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 SLC25A27O95847 323 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 BCRP11274 1271 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 U2AF2P26368 475 aaKnown RBP eCLIP13.33□□□□□ -0.284e-37■■■■■ 31.6
FN1-217ENST00000471193 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.28
FN1-217ENST00000471193 UBE2SQ16763 222 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■□□□ 13.2
FN1-217ENST00000471193 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
FN1-217ENST00000471193 ANKRD13CQ8N6S4 541 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 SHCBP1Q8NEM2 672 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 CHST13Q8NET6 341 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 BICD2Q8TD16 824 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 TRERF1Q96PN7 1200 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 ACAD9Q9H845 621 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 PSTPIP2Q9H939 334 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
FN1-217ENST00000471193 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 MEIS2O14770 477 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 CA12O43570 354 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 TLR2O60603 784 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 HSD17B4P51659 736 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
FN1-217ENST00000471193 NR5A1Q13285 461 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 CRHR2Q13324 411 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 Q3C1V9 767 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 RASGRP4Q8TDF6 673 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 MAF1Q9H063 256 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
FN1-217ENST00000471193 ERCC3P19447 782 aa13.31□□□□□ -0.28
FN1-217ENST00000471193 CCNA1P78396 465 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms