RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 RIOX2Q8IUF8 465 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-209ENST00000470247 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
SREBF1-209ENST00000470247 PARK7Q99497 189 aaKnown RBP12.96□□□□□ -0.33
SREBF1-209ENST00000470247 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
SREBF1-209ENST00000470247 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 SPATC1LQ9H0A9 340 aa12.96□□□□□ -0.33
SREBF1-209ENST00000470247 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-209ENST00000470247 ABCB11O95342 1321 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 BTBD18B2RXH4 712 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 KIF28PB7ZC32 967 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 MEIS2O14770 477 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 CA12O43570 354 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 ALAS1P13196 640 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 NAPAP54920 295 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 ERVK-24P63145 666 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 GHRHRQ02643 423 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 CRHR2Q13324 411 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 TAF1CQ15572 869 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-209ENST00000470247 SNRNP48Q6IEG0 339 aaKnown RBP12.95□□□□□ -0.34
SREBF1-209ENST00000470247 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 ANKRD13CQ8N6S4 541 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 TNFRSF25Q93038 417 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 TRERF1Q96PN7 1200 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 RIC8AQ9NPQ8 531 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
SREBF1-209ENST00000470247 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
SREBF1-209ENST00000470247 MRPL11Q9Y3B7 192 aaKnown RBP12.95□□□□□ -0.34
SREBF1-209ENST00000470247 NFIBO00712 420 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 TLR2O60603 784 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 XBP1P17861 261 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 CLK2P49760 499 aaKnown RBP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 NLRP5P59047 1200 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 TRAF1Q13077 416 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 TKFCQ3LXA3 575 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 DNAJC5GQ8N7S2 189 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 CCDC148Q8NFR7 591 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 PORCNQ9H237 461 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 PSTPIP2Q9H939 334 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 ZFYVE28Q9HCC9 887 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
SREBF1-209ENST00000470247 CTDP1Q9Y5B0 961 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-209ENST00000470247 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 H3BQV1 296 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 EDIL3O43854 480 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 PDIA4P13667 645 aaKnown RBP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 ERCC3P19447 782 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 CALML3P27482 149 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 RESTQ13127 1097 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 NR5A1Q13285 461 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 TRIM29Q14134 588 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 PLS1Q14651 629 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 FAM110CQ1W6H9 321 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 USP17L6PQ6QN14 398 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 DIS3L2Q8IYB7 885 aaKnown RBP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 SHCBP1Q8NEM2 672 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 CHST13Q8NET6 341 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 CCDC12Q8WUD4 166 aaPredicted RBP12.93□□□□□ -0.34
SREBF1-209ENST00000470247 CFHR5Q9BXR6 569 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 C6orf50Q9HD87 102 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 RNF186Q9NXI6 227 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
SREBF1-209ENST00000470247 THSD7BQ9C0I4 1608 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 SLC25A27O95847 323 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 GNA11P29992 359 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 KRT2P35908 639 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 HSD17B4P51659 736 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 ADCY7P51828 1080 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 MRPL12P52815 198 aaKnown RBP12.92□□□□□ -0.34
SREBF1-209ENST00000470247 NUCB2P80303 420 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 UBE2SQ16763 222 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 FERMT3Q86UX7 667 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 CUL5Q93034 780 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 FOXP1Q9H334 677 aaPredicted RBP12.92□□□□□ -0.34
SREBF1-209ENST00000470247 EFCC1Q9HA90 598 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 TMEM260Q9NX78 707 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
SREBF1-209ENST00000470247 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms