RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PFASO15067 1338 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 CNTNAP5Q8WYK1 1306 aa12.85□□□□□ -0.35
MSH5-212ENST00000467319 ZNFX1Q9P2E3 1918 aaKnown RBP12.84□□□□□ -0.35
MSH5-212ENST00000467319 NFIBO00712 420 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 ZBTB5O15062 677 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 ALAS1P13196 640 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 CYP2B6P20813 491 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
MSH5-212ENST00000467319 GNAQP50148 359 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 GHRHRQ02643 423 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 APOBRQ0VD83 1088 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 SRBD1Q8N5C6 995 aaKnown RBP12.84□□□□□ -0.35
MSH5-212ENST00000467319 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 KIF2CQ99661 725 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 MAF1Q9H063 256 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
MSH5-212ENST00000467319 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
MSH5-212ENST00000467319 ASTN1O14525 1302 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 ABCB11O95342 1321 aa12.84□□□□□ -0.35
MSH5-212ENST00000467319 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.35
MSH5-212ENST00000467319 BAZ2BQ9UIF8 2168 aaKnown RBP12.83□□□□□ -0.36
MSH5-212ENST00000467319 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 OPLAHO14841 1288 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 DHX16O60231 1041 aaKnown RBP12.83□□□□□ -0.36
MSH5-212ENST00000467319 PGK2P07205 417 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 TRIM32Q13049 653 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 RTN1Q16799 776 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
MSH5-212ENST00000467319 CCDC144CPQ8IYA2 1237 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 PIGSQ96S52 555 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
MSH5-212ENST00000467319 CYP39A1Q9NYL5 469 aa12.83□□□□□ -0.36
MSH5-212ENST00000467319 PNMA6FA0A0J9YX94 578 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 CDC27P30260 824 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 FGD1P98174 961 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 USH1GQ495M9 461 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 FBXO11Q86XK2 927 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 AMNQ9BXJ7 453 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
MSH5-212ENST00000467319 PDRG1Q9NUG6 133 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 SLC5A4Q9NY91 659 aa12.82□□□□□ -0.36
MSH5-212ENST00000467319 KIAA0100Q14667 2235 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 CYBAP13498 195 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 METAP2P50579 478 aaKnown RBP eCLIP12.81□□□□□ -0.36
MSH5-212ENST00000467319 UBXN2AP68543 259 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 MTFR1Q15390 333 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 MSL3Q8N5Y2 521 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 RRP36Q96EU6 259 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 C22orf23Q9BZE7 217 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 MKI67P46013 3256 aaKnown RBP12.81□□□□□ -0.36
MSH5-212ENST00000467319 SYNGAP1Q96PV0 1343 aa12.81□□□□□ -0.36
MSH5-212ENST00000467319 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 POTEB2H3BUK9 544 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 CCL5P13501 91 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 CYP2C19P33261 490 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 AK2P54819 239 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 RPS6P62753 249 aaKnown RBP12.8□□□□□ -0.36
MSH5-212ENST00000467319 CNTN2Q02246 1040 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
MSH5-212ENST00000467319 TRAF1Q13077 416 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 NTRK3Q16288 839 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 NSMFQ6X4W1 530 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 TRPV1Q8NER1 839 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 DDX11Q96FC9 970 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
MSH5-212ENST00000467319 TBC1D32Q96NH3 1257 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 UNC93B1Q9H1C4 597 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 MRPL11Q9Y3B7 192 aaKnown RBP12.8□□□□□ -0.36
MSH5-212ENST00000467319 MCM3APO60318 1980 aa12.8□□□□□ -0.36
MSH5-212ENST00000467319 CCDC196A0A1B0GTZ2 297 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
MSH5-212ENST00000467319 HSD17B4P51659 736 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
MSH5-212ENST00000467319 MFSD14CQ5VZR4 134 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 RNF207Q6ZRF8 634 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 MORC4Q8TE76 937 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 SHISA4Q96DD7 197 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.36
MSH5-212ENST00000467319 COL20A1Q9P218 1284 aa12.79□□□□□ -0.36
MSH5-212ENST00000467319 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
MSH5-212ENST00000467319 SEC63Q9UGP8 760 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms