RNA–Protein interactions for RNA: ENST00000465743.2

COL2A1-203, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 4

Gene COL2A1, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-203ENST00000465743 ADAMTS4O75173 837 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 PTGS1P23219 599 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 CYB5R4Q7L1T6 521 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 DGKHQ86XP1 1220 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 UBA5Q9GZZ9 404 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 KAT14Q9H8E8 782 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 ATP11BQ9Y2G3 1177 aa23.64■■□□□ 1.37
COL2A1-203ENST00000465743 SGSM2O43147 1006 aa23.63■■□□□ 1.37
COL2A1-203ENST00000465743 CYP21A2P08686 494 aa23.63■■□□□ 1.37
COL2A1-203ENST00000465743 LAMA2P24043 3122 aaKnown RBP23.62■■□□□ 1.37
COL2A1-203ENST00000465743 CCDC144BQ3MJ40 725 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 TRIM60Q495X7 471 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 SLC30A10Q6XR72 485 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 SLC39A5Q6ZMH5 540 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 KRT23Q9C075 422 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 FAM184BQ9ULE4 1060 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 PHF24Q9UPV7 400 aa23.62■■□□□ 1.37
COL2A1-203ENST00000465743 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.61■■□□□ 1.37
COL2A1-203ENST00000465743 MDM2Q00987 491 aaPredicted RBP23.61■■□□□ 1.37
COL2A1-203ENST00000465743 STOX1Q6ZVD7 989 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 CLEC4DQ8WXI8 215 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 ANKS1AQ92625 1134 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 UBAC1Q9BSL1 405 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 ABHD16BQ9H3Z7 469 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 CNNM2Q9H8M5 875 aa23.61■■□□□ 1.37
COL2A1-203ENST00000465743 A0A1W2PQ45 241 aaPredicted RBP23.6■■□□□ 1.37
COL2A1-203ENST00000465743 A0A1W2PQY0 241 aa23.6■■□□□ 1.37
COL2A1-203ENST00000465743 SOX1O00570 391 aaPredicted RBP23.6■■□□□ 1.37
COL2A1-203ENST00000465743 BAATQ14032 418 aaPredicted RBP23.6■■□□□ 1.37
COL2A1-203ENST00000465743 USH1GQ495M9 461 aa23.6■■□□□ 1.37
COL2A1-203ENST00000465743 RNF180Q86T96 592 aa23.6■■□□□ 1.37
COL2A1-203ENST00000465743 FBXO16Q8IX29 292 aaPredicted RBP23.6■■□□□ 1.37
COL2A1-203ENST00000465743 PTPDC1A2A3K4 754 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 SNX17Q15036 470 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 SEC23AQ15436 765 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 CCDC178Q5BJE1 867 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 GPATCH4Q5T3I0 446 aaKnown RBP23.59■■□□□ 1.37
COL2A1-203ENST00000465743 EEPD1Q7L9B9 569 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 SENP2Q9HC62 589 aa23.59■■□□□ 1.37
COL2A1-203ENST00000465743 DUSP11O75319 330 aaKnown RBP23.58■■□□□ 1.37
COL2A1-203ENST00000465743 CDC37Q16543 378 aaPredicted RBP23.58■■□□□ 1.37
COL2A1-203ENST00000465743 TMEM63BQ5T3F8 832 aa23.58■■□□□ 1.37
COL2A1-203ENST00000465743 IFIT1BQ5T764 474 aaKnown RBP23.58■■□□□ 1.37
COL2A1-203ENST00000465743 PRDM5Q9NQX1 630 aaPredicted RBP23.58■■□□□ 1.37
COL2A1-203ENST00000465743 PDGFCQ9NRA1 345 aa23.58■■□□□ 1.37
COL2A1-203ENST00000465743 U3KPZ7 1027 aaPredicted RBP23.58■■□□□ 1.37
COL2A1-203ENST00000465743 WDR19Q8NEZ3 1342 aa23.58■■□□□ 1.36
COL2A1-203ENST00000465743 C6orf222P0C671 652 aaPredicted RBP23.57■■□□□ 1.36
COL2A1-203ENST00000465743 CALML3P27482 149 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 NT5C2P49902 561 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 CHST3Q7LGC8 479 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 ADGRF4Q8IZF3 695 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 STAG2Q8N3U4 1231 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 KLHDC9Q8NEP7 349 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 PDLIM7Q9NR12 457 aa23.57■■□□□ 1.36
COL2A1-203ENST00000465743 RBM8AQ9Y5S9 174 aaKnown RBP23.57■■□□□ 1.36
COL2A1-203ENST00000465743 ASB14A6NK59 587 aa23.56■■□□□ 1.36
COL2A1-203ENST00000465743 E7EWF7 191 aa23.56■■□□□ 1.36
COL2A1-203ENST00000465743 ALDH5A1P51649 535 aaPredicted RBP23.56■■□□□ 1.36
COL2A1-203ENST00000465743 ACLYP53396 1101 aa23.56■■□□□ 1.36
COL2A1-203ENST00000465743 ASPRV1Q53RT3 343 aa23.56■■□□□ 1.36
COL2A1-203ENST00000465743 CCSAPQ6IQ19 270 aaPredicted RBP23.56■■□□□ 1.36
COL2A1-203ENST00000465743 SH3RF1Q7Z6J0 888 aa23.56■■□□□ 1.36
COL2A1-203ENST00000465743 UBE2OQ9C0C9 1292 aaKnown RBP23.56■■□□□ 1.36
COL2A1-203ENST00000465743 UPF3AQ9H1J1 476 aaKnown RBP23.56■■□□□ 1.36
COL2A1-203ENST00000465743 CTAGE5O15320 804 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 PARP1P09874 1014 aaKnown RBP23.55■■□□□ 1.36
COL2A1-203ENST00000465743 BMP8BP34820 402 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 TLE2Q04725 743 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 COL9A3Q14050 684 aaPredicted RBP23.55■■□□□ 1.36
COL2A1-203ENST00000465743 KCNA10Q16322 511 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 LRCH3Q96II8 777 aa23.55■■□□□ 1.36
COL2A1-203ENST00000465743 BAZ2BQ9UIF8 2168 aaKnown RBP23.55■■□□□ 1.36
COL2A1-203ENST00000465743 A0A1W2PPC1 479 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 DHX16O60231 1041 aaKnown RBP23.54■■□□□ 1.36
COL2A1-203ENST00000465743 PQBP1O60828 265 aaKnown RBP23.54■■□□□ 1.36
COL2A1-203ENST00000465743 ANTXR2P58335 489 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 RPS6P62753 249 aaKnown RBP23.54■■□□□ 1.36
COL2A1-203ENST00000465743 BEX3Q00994 111 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 TNFAIP2Q03169 654 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 TRDNQ13061 729 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 QRICH1Q2TAL8 776 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 RNF207Q6ZRF8 634 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 NOL8Q76FK4 1167 aaKnown RBP23.54■■□□□ 1.36
COL2A1-203ENST00000465743 MAP4K1Q92918 833 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 LSG1Q9H089 658 aaKnown RBP23.54■■□□□ 1.36
COL2A1-203ENST00000465743 VAT1LQ9HCJ6 419 aa23.54■■□□□ 1.36
COL2A1-203ENST00000465743 SMPD1P17405 629 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 CST5P28325 142 aaPredicted RBP23.53■■□□□ 1.36
COL2A1-203ENST00000465743 GJA9P57773 515 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 SLC35G1Q2M3R5 365 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 TAPT1Q6NXT6 567 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 RALYLQ86SE5 291 aaKnown RBP23.53■■□□□ 1.36
COL2A1-203ENST00000465743 ESYT1Q9BSJ8 1104 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 JMJD4Q9H9V9 463 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 STARD7Q9NQZ5 370 aa23.53■■□□□ 1.36
COL2A1-203ENST00000465743 TRIM43BA6NCK2 446 aa23.52■■□□□ 1.36
COL2A1-203ENST00000465743 IFIT3O14879 490 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms