RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MOCS3O95396 460 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SUPT20HL2P0C7V6 817 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PRMT2P55345 433 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PWP2Q15269 919 aaKnown RBP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MED10Q9BTT4 135 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 COA1Q9GZY4 146 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GPR108Q9NPR9 543 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 A0A1B0GVL5 298 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SPTLC2O15270 562 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ECM2O94769 699 aaPredicted RBP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPARGP37231 505 aaPredicted RBP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 HUNKP57058 714 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GCKRQ14397 625 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SPECC1Q5M775 1068 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 DEPTORQ8TB45 409 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NAA15Q9BXJ9 866 aaKnown RBP6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CSRNP2Q9H175 543 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RABEP2Q9H5N1 569 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPP2R3BQ9Y5P8 575 aa6.9□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FRMD3A2A2Y4 597 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CTSWP56202 376 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MIS18BP1Q6P0N0 1132 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARMCX6Q7L4S7 300 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RNF169Q8NCN4 708 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FAM212AQ96EL1 285 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PLA2G12BQ9BX93 195 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MAK16Q9BXY0 300 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 USP42Q9H9J4 1324 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARHGEF35A5YM69 484 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ZNF189O75820 626 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 AFMP43652 599 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SARNPP82979 210 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GRAPQ13588 217 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPP1R2P3Q6NXS1 205 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CCDC121Q6ZUS5 278 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 HEATR3Q7Z4Q2 680 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PRPF38AQ8NAV1 312 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GRAPLQ8TC17 118 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 UPF1Q92900 1129 aaKnown RBP eCLIP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 JAKMIP2Q96AA8 810 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GUCA1BQ9UMX6 200 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 AOX1Q06278 1338 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NHSQ6T4R5 1651 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KPNA6O60684 536 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EZH2Q15910 746 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TDRD12Q587J7 1177 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SLC45A4Q5BKX6 768 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EHBP1Q8NDI1 1231 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 LMBR1Q8WVP7 490 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 OXCT2Q9BYC2 517 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NRBP1Q9UHY1 535 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MMP10P09238 476 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SKIP12755 728 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARL1P40616 181 aaPredicted RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 LIN9Q5TKA1 542 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EFCAB13Q8IY85 973 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RAB42Q8N4Z0 105 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PGBD4Q96DM1 585 aa6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 IPO11Q9UI26 975 aaKnown RBP6.89□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CICQ96RK0 1608 aaPredicted RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KLF18A0A0U1RQI7 1052 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GIPC1O14908 333 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NCAM2O15394 837 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FLOT1O75955 427 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 POLR2MP0CAP2 368 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TUBB4BP68371 445 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FAM160A1Q05DH4 1040 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SURF1Q15526 300 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KYAT1Q16773 422 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 OSBP2Q969R2 916 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CTAGE1Q96RT6 745 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SRPK1Q96SB4 655 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 IRF2BPLQ9H1B7 796 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 POLR3EQ9NVU0 708 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FRMD4BQ9Y2L6 1034 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MSCO60682 206 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 FOSP01100 380 aaPredicted RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PCP11498 1178 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PDE6AP16499 860 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 DDX5P17844 614 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RGS2P41220 211 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MTIF2P46199 727 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARL4DP49703 201 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KIF5AQ12840 1032 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TCERG1LQ5VWI1 586 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 C7orf31Q8N865 590 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CACTINQ8WUQ7 758 aaKnown RBP6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 LPIN2Q92539 896 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 THSD7AQ9UPZ6 1657 aa6.88□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GMNNO75496 209 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms